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Zinc in PDB 3r6f: Crystal Structure of A Zinc-Containing Hit Family Protein From Encephalitozoon Cuniculi

Protein crystallography data

The structure of Crystal Structure of A Zinc-Containing Hit Family Protein From Encephalitozoon Cuniculi, PDB code: 3r6f was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.33 / 1.85
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 44.570, 44.570, 233.310, 90.00, 90.00, 120.00
R / Rfree (%) 20.7 / 24.3

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of A Zinc-Containing Hit Family Protein From Encephalitozoon Cuniculi (pdb code 3r6f). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of A Zinc-Containing Hit Family Protein From Encephalitozoon Cuniculi, PDB code: 3r6f:

Zinc binding site 1 out of 1 in 3r6f

Go back to Zinc Binding Sites List in 3r6f
Zinc binding site 1 out of 1 in the Crystal Structure of A Zinc-Containing Hit Family Protein From Encephalitozoon Cuniculi


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of A Zinc-Containing Hit Family Protein From Encephalitozoon Cuniculi within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn132

b:21.7
occ:1.00
ND1 A:HIS89 2.1 19.2 1.0
ND1 A:HIS44 2.1 19.6 1.0
SG A:CYS4 2.3 19.7 1.0
SG A:CYS7 2.3 19.2 1.0
CG A:HIS89 3.1 19.3 1.0
CE1 A:HIS89 3.1 17.5 1.0
CE1 A:HIS44 3.1 20.6 1.0
CG A:HIS44 3.1 19.1 1.0
CB A:CYS4 3.2 23.2 1.0
CB A:HIS89 3.4 18.6 1.0
CB A:HIS44 3.4 18.4 1.0
CB A:CYS7 3.4 20.0 1.0
N A:CYS7 3.6 18.3 1.0
CA A:CYS7 4.0 19.2 1.0
NE2 A:HIS89 4.2 22.2 1.0
CD2 A:HIS89 4.2 19.2 1.0
NE2 A:HIS44 4.2 19.4 1.0
CD2 A:HIS44 4.2 20.1 1.0
CA A:HIS44 4.3 17.9 1.0
C A:PHE6 4.6 18.0 1.0
CA A:CYS4 4.6 23.9 1.0
CB A:PHE6 4.7 17.2 1.0
CA A:HIS89 4.7 18.1 1.0
O A:HOH164 4.7 28.2 1.0
C A:CYS4 4.9 22.6 1.0
N A:PHE6 4.9 18.1 1.0
CA A:PHE6 4.9 18.1 1.0
O A:CYS4 4.9 21.9 1.0

Reference:

T.E.Edwards, J.Abendroth, J.Leonard, Seattle Structural Genomics Center For Infectious Disease(Ssgcid). Crystal Structure of A Zinc-Containing Hit Family Protein From Encephalitozoon Cuniculi To Be Published.
Page generated: Wed Dec 16 04:46:53 2020

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