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Zinc in PDB 3ksq: Discovery of C-Imidazole Azaheptapyridine Fpt Inhibitors

Enzymatic activity of Discovery of C-Imidazole Azaheptapyridine Fpt Inhibitors

All present enzymatic activity of Discovery of C-Imidazole Azaheptapyridine Fpt Inhibitors:
2.5.1.58;

Protein crystallography data

The structure of Discovery of C-Imidazole Azaheptapyridine Fpt Inhibitors, PDB code: 3ksq was solved by H.Y.Zhu, A.B.Cooper, G.Njoroge, P.Kirschmeier, C.Strickland, A.Hruza, V.M.Girijavallabhan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.64 / 2.10
Space group P 61
Cell size a, b, c (Å), α, β, γ (°) 171.122, 171.122, 69.269, 90.00, 90.00, 120.00
R / Rfree (%) 19.3 / 21.9

Other elements in 3ksq:

The structure of Discovery of C-Imidazole Azaheptapyridine Fpt Inhibitors also contains other interesting chemical elements:

Magnesium (Mg) 1 atom
Chlorine (Cl) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Discovery of C-Imidazole Azaheptapyridine Fpt Inhibitors (pdb code 3ksq). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Discovery of C-Imidazole Azaheptapyridine Fpt Inhibitors, PDB code: 3ksq:

Zinc binding site 1 out of 1 in 3ksq

Go back to Zinc Binding Sites List in 3ksq
Zinc binding site 1 out of 1 in the Discovery of C-Imidazole Azaheptapyridine Fpt Inhibitors


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Discovery of C-Imidazole Azaheptapyridine Fpt Inhibitors within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn2001

b:38.9
occ:1.00
OD2 B:ASP297 2.1 32.8 1.0
N3 B:Z96439 2.1 48.0 1.0
NE2 B:HIS362 2.2 31.6 1.0
SG B:CYS299 2.4 32.4 1.0
OD1 B:ASP297 2.5 29.2 1.0
CG B:ASP297 2.5 28.1 1.0
C28 B:Z96439 3.0 52.0 1.0
CD2 B:HIS362 3.1 31.7 1.0
C21 B:Z96439 3.2 46.5 1.0
CE1 B:HIS362 3.2 31.2 1.0
CB B:CYS299 3.3 27.9 1.0
CE2 B:TYR361 3.7 29.4 1.0
CB B:ASP297 4.0 28.0 1.0
N B:CYS299 4.0 28.0 1.0
CG B:HIS362 4.2 31.0 1.0
N2 B:Z96439 4.2 53.2 1.0
O B:HOH505 4.2 45.3 1.0
C27 B:Z96439 4.2 50.7 1.0
CA B:CYS299 4.3 27.6 1.0
ND1 B:HIS362 4.3 32.7 1.0
CB B:ASP352 4.4 32.2 1.0
OH B:TYR361 4.5 34.9 1.0
CD2 B:TYR361 4.6 27.9 1.0
CZ B:TYR361 4.6 35.3 1.0
CG B:ASP352 4.6 41.5 1.0
CE1 B:TYR300 4.9 32.2 1.0
OD2 B:ASP352 4.9 51.0 1.0
CA B:ASP352 4.9 30.9 1.0

Reference:

H.Y.Zhu, A.B.Cooper, J.Desai, G.Njoroge, P.Kirschmeier, W.R.Bishop, C.Strickland, A.Hruza, R.J.Doll, V.M.Girijavallabhan. Discovery of C-Imidazole Azaheptapyridine Fpt Inhibitors. Bioorg.Med.Chem.Lett. V. 20 1134 2010.
ISSN: ISSN 0960-894X
PubMed: 20056542
DOI: 10.1016/J.BMCL.2009.12.013
Page generated: Sat Oct 26 08:12:17 2024

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