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Zinc in PDB 3j9s: Single Particle Cryo-Em Structure of Rotavirus VP6 at 2.6 Angstrom Resolution

Other elements in 3j9s:

The structure of Single Particle Cryo-Em Structure of Rotavirus VP6 at 2.6 Angstrom Resolution also contains other interesting chemical elements:

Chlorine (Cl) 1 atom
Calcium (Ca) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Single Particle Cryo-Em Structure of Rotavirus VP6 at 2.6 Angstrom Resolution (pdb code 3j9s). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Single Particle Cryo-Em Structure of Rotavirus VP6 at 2.6 Angstrom Resolution, PDB code: 3j9s:

Zinc binding site 1 out of 1 in 3j9s

Go back to Zinc Binding Sites List in 3j9s
Zinc binding site 1 out of 1 in the Single Particle Cryo-Em Structure of Rotavirus VP6 at 2.6 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Single Particle Cryo-Em Structure of Rotavirus VP6 at 2.6 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn501

b:20.0
occ:1.00
NE2 A:HIS153 2.3 20.0 1.0
CL A:CL502 2.8 20.0 1.0
CD2 A:HIS153 3.1 20.0 1.0
CE1 A:HIS153 3.3 20.0 1.0
CG A:HIS153 4.3 20.0 1.0
ND1 A:HIS153 4.4 20.0 1.0
CD A:LYS154 4.4 20.0 1.0
CE A:LYS154 4.9 20.0 1.0

Reference:

T.Grant, N.Grigorieff. Measuring the Optimal Exposure For Single Particle Cryo-Em Using A 2.6 A Reconstruction of Rotavirus VP6 To Be Published.
Page generated: Wed Dec 16 04:27:36 2020

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