Atomistry » Zinc » PDB 3iqs-3jck » 3j9d
Atomistry »
  Zinc »
    PDB 3iqs-3jck »
      3j9d »

Zinc in PDB 3j9d: Atomic Structure of A Non-Enveloped Virus Reveals pH Sensors For A Coordinated Process of Cell Entry

Zinc Binding Sites:

The binding sites of Zinc atom in the Atomic Structure of A Non-Enveloped Virus Reveals pH Sensors For A Coordinated Process of Cell Entry (pdb code 3j9d). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Atomic Structure of A Non-Enveloped Virus Reveals pH Sensors For A Coordinated Process of Cell Entry, PDB code: 3j9d:

Zinc binding site 1 out of 1 in 3j9d

Go back to Zinc Binding Sites List in 3j9d
Zinc binding site 1 out of 1 in the Atomic Structure of A Non-Enveloped Virus Reveals pH Sensors For A Coordinated Process of Cell Entry


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Atomic Structure of A Non-Enveloped Virus Reveals pH Sensors For A Coordinated Process of Cell Entry within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1001

b:76.0
occ:1.00
NE2 A:HIS164 2.3 29.3 1.0
SG A:CYS162 2.3 92.1 1.0
SG A:CYS617 2.7 71.0 1.0
CB A:CYS617 2.7 31.2 1.0
SG A:CYS851 2.7 39.6 1.0
CD2 A:HIS164 3.1 25.0 1.0
CB A:CYS162 3.1 26.1 1.0
CE1 A:HIS164 3.4 24.3 1.0
CA A:CYS162 3.8 27.3 1.0
CD1 A:LEU847 3.8 20.1 1.0
CB A:CYS851 4.1 27.6 1.0
CA A:CYS617 4.1 23.2 1.0
CG A:HIS164 4.3 19.1 1.0
OG1 A:THR619 4.4 29.7 1.0
ND1 A:HIS164 4.4 22.3 1.0
CG A:LEU847 4.5 19.4 1.0
CD A:PRO618 4.5 24.4 1.0
N A:CYS162 4.8 31.0 1.0
C A:CYS617 4.8 25.9 1.0
N A:LEU163 4.9 22.2 1.0
C A:CYS162 4.9 29.6 1.0
CD2 A:LEU847 4.9 18.5 1.0
N A:PRO618 4.9 23.6 1.0
CE A:LYS160 5.0 32.6 1.0

Reference:

X.Zhang, A.Patel, C.C.Celma, X.Yu, P.Roy, Z.H.Zhou. Atomic Model of A Nonenveloped Virus Reveals pH Sensors For A Coordinated Process of Cell Entry. Nat.Struct.Mol.Biol. V. 23 74 2016.
ISSN: ISSN 1545-9993
PubMed: 26641711
DOI: 10.1038/NSMB.3134
Page generated: Wed Dec 16 04:27:34 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy