Zinc in PDB 3j9d: Atomic Structure of A Non-Enveloped Virus Reveals pH Sensors For A Coordinated Process of Cell Entry

The binding sites of Zinc atom in the Atomic Structure of A Non-Enveloped Virus Reveals pH Sensors For A Coordinated Process of Cell Entry (pdb code 3j9d). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Atomic Structure of A Non-Enveloped Virus Reveals pH Sensors For A Coordinated Process of Cell Entry, PDB code: 3j9d:

Zinc binding site 1 out of 1 in the Atomic Structure of A Non-Enveloped Virus Reveals pH Sensors For A Coordinated Process of Cell Entry


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Atomic Structure of A Non-Enveloped Virus Reveals pH Sensors For A Coordinated Process of Cell Entry within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn1001 b:76.0 occ:1.00 NE2 A:HIS164 2.3 29.3 1.0 SG A:CYS162 2.3 92.1 1.0 SG A:CYS617 2.7 71.0 1.0 CB A:CYS617 2.7 31.2 1.0 SG A:CYS851 2.7 39.6 1.0 CD2 A:HIS164 3.1 25.0 1.0 CB A:CYS162 3.1 26.1 1.0 CE1 A:HIS164 3.4 24.3 1.0 CA A:CYS162 3.8 27.3 1.0 CD1 A:LEU847 3.8 20.1 1.0 CB A:CYS851 4.1 27.6 1.0 CA A:CYS617 4.1 23.2 1.0 CG A:HIS164 4.3 19.1 1.0 OG1 A:THR619 4.4 29.7 1.0 ND1 A:HIS164 4.4 22.3 1.0 CG A:LEU847 4.5 19.4 1.0 CD A:PRO618 4.5 24.4 1.0 N A:CYS162 4.8 31.0 1.0 C A:CYS617 4.8 25.9 1.0 N A:LEU163 4.9 22.2 1.0 C A:CYS162 4.9 29.6 1.0 CD2 A:LEU847 4.9 18.5 1.0 N A:PRO618 4.9 23.6 1.0 CE A:LYS160 5.0 32.6 1.0

X.Zhang, A.Patel, C.C.Celma, X.Yu, P.Roy, Z.H.Zhou. Atomic Model of A Nonenveloped Virus Reveals pH Sensors For A Coordinated Process of Cell Entry. Nat.Struct.Mol.Biol. V. 23 74 2016.
ISSN: ISSN 1545-9993
PubMed: 26641711
DOI: 10.1038/NSMB.3134