Zinc in PDB 3io6: Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C92-A

The structure of Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C92-A, PDB code: 3io6 was solved by M.W.Kim, Y.Chelliah, S.W.Kim, Z.Otwinowski, I.Bezprozvanny, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	38.67 / 3.70
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	163.401, 101.242, 138.190, 90.00, 92.00, 90.00
R / Rfree (%)	24.5 / 29.3

The structure of Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C92-A also contains other interesting chemical elements:

Calcium

(Ca)

9 atoms

The binding sites of Zinc atom in the Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C92-A (pdb code 3io6). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 5 binding sites of Zinc where determined in the Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C92-A, PDB code: 3io6:
Jump to Zinc binding site number: 1; 2; 3; 4; 5;

Zinc binding site 1 out of 5 in the Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C92-A


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C92-A within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn450 b:0.9 occ:1.00 NZ A:LYS137 2.8 80.0 1.0 CE1 A:HIS203 3.1 80.0 1.0 NE2 A:HIS203 3.6 80.0 1.0 CE A:LYS137 3.9 80.0 1.0 CB A:ASN201 3.9 80.0 1.0 CG A:ASN201 4.0 80.0 1.0 OD1 A:ASN201 4.1 80.0 1.0 ND1 A:HIS203 4.3 80.0 1.0 ND2 A:ASN201 4.5 80.0 1.0 CB A:PRO133 4.6 80.0 1.0 CD2 A:HIS203 4.9 80.0 1.0

Zinc binding site 2 out of 5 in the Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C92-A


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C92-A within 5.0Å range: probe atom residue distance (Å) B Occ C:Zn450 b:0.9 occ:1.00 O C:HIS39 2.2 80.0 1.0 ND1 C:HIS39 2.7 80.0 1.0 C C:HIS39 3.4 80.0 1.0 CE1 C:HIS39 3.5 80.0 1.0 OD1 C:ASP41 3.5 80.0 1.0 CG C:HIS39 3.6 80.0 1.0 CG C:ASP41 3.9 80.0 1.0 CB C:HIS39 4.0 80.0 1.0 OD2 C:ASP41 4.0 80.0 1.0 C C:PRO40 4.2 80.0 1.0 CA C:HIS39 4.3 80.0 1.0 N C:ASP41 4.3 80.0 1.0 N C:PRO40 4.3 80.0 1.0 CA C:PRO40 4.4 80.0 1.0 O C:PRO40 4.5 80.0 1.0 NE2 C:HIS39 4.5 80.0 1.0 CD2 C:HIS39 4.6 80.0 1.0 CA C:ASP41 4.8 80.0 1.0 CA C:GLY13 4.9 80.0 1.0 CB C:ASP41 4.9 80.0 1.0

Zinc binding site 3 out of 5 in the Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C92-A


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C92-A within 5.0Å range: probe atom residue distance (Å) B Occ C:Zn451 b:0.9 occ:1.00 CE1 C:HIS203 2.8 80.0 1.0 NE2 C:HIS203 3.1 80.0 1.0 NZ C:LYS137 3.1 80.0 1.0 CE C:LYS137 3.5 80.0 1.0 OD1 C:ASN201 3.6 80.0 1.0 CG C:ASN201 3.8 80.0 1.0 CB C:ASN201 4.0 80.0 1.0 ND1 C:HIS203 4.1 80.0 1.0 CB C:PRO133 4.1 80.0 1.0 CD2 C:HIS203 4.4 80.0 1.0 ND2 C:ASN201 4.5 80.0 1.0 CD C:LYS137 4.7 80.0 1.0 CG C:HIS203 4.9 80.0 1.0 O C:ASN201 5.0 80.0 1.0

Zinc binding site 4 out of 5 in the Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C92-A


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 4 of Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C92-A within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn450 b:0.9 occ:1.00 CE1 B:HIS203 2.6 80.0 1.0 NE2 B:HIS203 2.8 80.0 1.0 NZ B:LYS137 2.8 80.0 1.0 OD1 B:ASN201 3.0 80.0 1.0 CG B:ASN201 3.7 80.0 1.0 ND1 B:HIS203 3.9 80.0 1.0 CE B:LYS137 3.9 80.0 1.0 CB B:ASN201 4.1 80.0 1.0 CD2 B:HIS203 4.1 80.0 1.0 CD B:LYS137 4.1 80.0 1.0 CG B:HIS203 4.6 80.0 1.0 ND2 B:ASN201 4.7 80.0 1.0 CB B:PRO133 4.7 80.0 1.0 O B:ASN201 4.7 80.0 1.0

Zinc binding site 5 out of 5 in the Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C92-A


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 5 of Huntingtin Amino-Terminal Region with 17 Gln Residues - Crystal C92-A within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn451 b:0.9 occ:1.00 O B:HIS39 1.9 80.0 1.0 ND1 B:HIS39 2.2 80.0 1.0 CE1 B:HIS39 2.9 80.0 1.0 C B:HIS39 3.1 80.0 1.0 CG B:HIS39 3.2 80.0 1.0 CB B:HIS39 3.7 80.0 1.0 NE2 B:HIS39 4.0 80.0 1.0 CA B:HIS39 4.0 80.0 1.0 CD2 B:HIS39 4.1 80.0 1.0 N B:PRO40 4.2 80.0 1.0 CA B:PRO40 4.3 80.0 1.0 C B:PRO40 4.7 80.0 1.0 N B:HIS39 4.7 80.0 1.0 CA B:GLY13 4.8 80.0 1.0 N B:ASP41 5.0 80.0 1.0

M.W.Kim, Y.Chelliah, S.W.Kim, Z.Otwinowski, I.Bezprozvanny. Secondary Structure of Huntingtin Amino-Terminal Region. Structure V. 17 1205 2009.
ISSN: ISSN 0969-2126
PubMed: 19748341
DOI: 10.1016/J.STR.2009.08.002