Zinc in PDB 3i3w: Structure of A Phosphoglucosamine Mutase From Francisella Tularensis

All present enzymatic activity of Structure of A Phosphoglucosamine Mutase From Francisella Tularensis:
5.4.2.10;

The structure of Structure of A Phosphoglucosamine Mutase From Francisella Tularensis, PDB code: 3i3w was solved by J.S.Brunzelle, Z.Wawrzak, T.Skarina, O.Onopriyenko, A.Savchenko, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.16 / 2.30
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	104.430, 206.680, 44.760, 90.00, 90.00, 90.00
R / Rfree (%)	19.4 / 23.6

The binding sites of Zinc atom in the Structure of A Phosphoglucosamine Mutase From Francisella Tularensis (pdb code 3i3w). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure of A Phosphoglucosamine Mutase From Francisella Tularensis, PDB code: 3i3w:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Structure of A Phosphoglucosamine Mutase From Francisella Tularensis


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of A Phosphoglucosamine Mutase From Francisella Tularensis within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn900 b:68.3 occ:0.50 OD2 A:ASP239 2.1 38.3 1.0 OD1 A:ASP243 2.1 47.3 1.0 OG A:SEP101 2.2 45.1 1.0 OD1 A:ASP241 2.4 49.1 1.0 O3P A:SEP101 2.6 41.9 1.0 CG A:ASP239 2.9 38.4 1.0 P A:SEP101 3.0 42.4 1.0 OD1 A:ASP239 3.0 36.7 1.0 CG A:ASP243 3.2 44.4 1.0 CG A:ASP241 3.3 45.0 1.0 CB A:SEP101 3.5 42.9 1.0 OD2 A:ASP243 3.7 45.9 1.0 OD2 A:ASP241 3.7 49.2 1.0 CA A:SEP101 4.0 42.8 1.0 O2P A:SEP101 4.0 40.4 1.0 CG A:ARG244 4.0 43.1 1.0 NE2 A:HIS326 4.1 43.4 1.0 N A:ASP243 4.2 42.1 1.0 NE A:ARG244 4.2 46.1 1.0 C A:SEP101 4.2 42.5 1.0 NZ A:LYS111 4.2 39.8 1.0 O1P A:SEP101 4.2 44.4 1.0 N A:HIS102 4.3 41.6 1.0 CB A:ASP239 4.3 37.6 1.0 CB A:ASP243 4.3 43.1 1.0 CD A:ARG244 4.4 44.8 1.0 N A:ARG244 4.4 41.2 1.0 N A:ASP241 4.5 40.6 1.0 CA A:ASP243 4.6 42.4 1.0 CB A:ASP241 4.6 42.2 1.0 N A:ALA242 4.7 42.3 1.0 C A:ASP243 4.7 42.0 1.0 CB A:ARG244 4.9 41.2 1.0 CD2 A:HIS326 4.9 43.9 1.0 CA A:ASP241 4.9 41.8 1.0 O A:SEP101 4.9 42.9 1.0 C A:ASP241 5.0 42.0 1.0

Zinc binding site 2 out of 2 in the Structure of A Phosphoglucosamine Mutase From Francisella Tularensis


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of A Phosphoglucosamine Mutase From Francisella Tularensis within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn900 b:57.5 occ:0.50 OG B:SEP101 2.1 42.7 1.0 OD2 B:ASP239 2.2 40.9 1.0 OD1 B:ASP243 2.2 46.8 1.0 OD1 B:ASP241 2.2 45.3 1.0 O3P B:SEP101 2.5 38.0 1.0 P B:SEP101 2.8 39.4 1.0 CG B:ASP239 3.0 39.4 1.0 OD1 B:ASP239 3.1 37.8 1.0 CG B:ASP243 3.2 43.2 1.0 CG B:ASP241 3.3 42.6 1.0 CB B:SEP101 3.4 42.0 1.0 OD2 B:ASP241 3.6 45.5 1.0 OD2 B:ASP243 3.7 44.4 1.0 O2P B:SEP101 3.8 39.0 1.0 CA B:SEP101 3.9 42.5 1.0 NE2 B:HIS326 4.0 40.3 1.0 O1P B:SEP101 4.1 41.4 1.0 N B:HIS102 4.1 41.3 1.0 NZ B:LYS111 4.1 40.4 1.0 N B:ASP243 4.2 42.5 1.0 C B:SEP101 4.2 42.0 1.0 CB B:ARG244 4.2 41.9 1.0 CB B:ASP243 4.3 42.8 1.0 N B:ARG244 4.3 42.1 1.0 NE B:ARG244 4.4 43.5 1.0 CB B:ASP239 4.4 39.4 1.0 N B:ASP241 4.5 41.5 1.0 CB B:ASP241 4.6 41.7 1.0 CA B:ASP243 4.6 42.5 1.0 C B:ASP243 4.6 42.4 1.0 N B:ALA242 4.7 42.0 1.0 CD2 B:HIS326 4.8 39.4 1.0 NH2 B:ARG244 4.8 44.4 1.0 CA B:ASP241 4.9 41.8 1.0 CB B:HIS102 4.9 40.6 1.0 CE1 B:HIS326 4.9 40.0 1.0 CA B:HIS102 5.0 41.2 1.0 O B:SEP101 5.0 42.1 1.0 CA B:ARG244 5.0 42.3 1.0 C B:ASP241 5.0 42.1 1.0 CZ B:ARG244 5.0 45.0 1.0

J.S.Brunzelle, Z.Wawrzak, T.Skarina, O.Onopriyenko, A.Savchenko, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid). Structure of A Phosphoglucosamine Mutase From Francisella Tularensis To Be Published.