Zinc in PDB 3gtv: Human-Mouse SOD1 Chimera
Enzymatic activity of Human-Mouse SOD1 Chimera
All present enzymatic activity of Human-Mouse SOD1 Chimera:
1.15.1.1;
Protein crystallography data
The structure of Human-Mouse SOD1 Chimera, PDB code: 3gtv
was solved by
S.V.Seetharaman,
A.B.Taylor,
P.J.Hart,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
40.35 /
2.20
|
Space group
|
P 1 21 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
112.625,
144.007,
112.613,
90.00,
119.82,
90.00
|
R / Rfree (%)
|
18.4 /
23.1
|
Zinc Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
12;
Binding sites:
The binding sites of Zinc atom in the Human-Mouse SOD1 Chimera
(pdb code 3gtv). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 12 binding sites of Zinc where determined in the
Human-Mouse SOD1 Chimera, PDB code: 3gtv:
Jump to Zinc binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Zinc binding site 1 out
of 12 in 3gtv
Go back to
Zinc Binding Sites List in 3gtv
Zinc binding site 1 out
of 12 in the Human-Mouse SOD1 Chimera
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Human-Mouse SOD1 Chimera within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn155
b:23.2
occ:1.00
|
OD1
|
A:ASP83
|
2.0
|
18.7
|
1.0
|
ND1
|
A:HIS63
|
2.1
|
19.4
|
1.0
|
ND1
|
A:HIS80
|
2.2
|
24.0
|
1.0
|
ND1
|
A:HIS71
|
2.2
|
24.6
|
1.0
|
CG
|
A:ASP83
|
2.8
|
22.5
|
1.0
|
OD2
|
A:ASP83
|
3.0
|
24.0
|
1.0
|
CE1
|
A:HIS63
|
3.0
|
20.5
|
1.0
|
CE1
|
A:HIS80
|
3.1
|
22.7
|
1.0
|
CG
|
A:HIS63
|
3.1
|
20.0
|
1.0
|
CE1
|
A:HIS71
|
3.1
|
22.9
|
1.0
|
CG
|
A:HIS80
|
3.3
|
22.5
|
1.0
|
CG
|
A:HIS71
|
3.3
|
25.2
|
1.0
|
CB
|
A:HIS63
|
3.5
|
19.7
|
1.0
|
CB
|
A:HIS71
|
3.7
|
23.9
|
1.0
|
CB
|
A:HIS80
|
3.7
|
20.2
|
1.0
|
O
|
A:LYS136
|
3.7
|
27.8
|
1.0
|
CA
|
A:HIS71
|
3.9
|
24.9
|
1.0
|
NE2
|
A:HIS63
|
4.2
|
19.4
|
1.0
|
CB
|
A:ASP83
|
4.2
|
21.4
|
1.0
|
CD2
|
A:HIS63
|
4.2
|
20.9
|
1.0
|
NE2
|
A:HIS80
|
4.2
|
23.7
|
1.0
|
NE2
|
A:HIS71
|
4.3
|
24.9
|
1.0
|
CD2
|
A:HIS80
|
4.3
|
25.8
|
1.0
|
CD2
|
A:HIS71
|
4.4
|
22.7
|
1.0
|
CA
|
A:ASP83
|
4.6
|
20.1
|
1.0
|
O
|
A:HOH165
|
4.8
|
25.0
|
1.0
|
N
|
A:GLY72
|
4.8
|
25.4
|
1.0
|
C
|
A:LYS136
|
4.8
|
27.8
|
1.0
|
CD2
|
A:HIS46
|
4.8
|
16.6
|
1.0
|
N
|
A:HIS80
|
4.8
|
23.5
|
1.0
|
CA
|
A:HIS80
|
4.9
|
23.2
|
1.0
|
N
|
A:HIS71
|
4.9
|
26.4
|
1.0
|
C
|
A:HIS71
|
4.9
|
24.0
|
1.0
|
N
|
A:ASP83
|
5.0
|
23.6
|
1.0
|
CA
|
A:HIS63
|
5.0
|
21.3
|
1.0
|
|
Zinc binding site 2 out
of 12 in 3gtv
Go back to
Zinc Binding Sites List in 3gtv
Zinc binding site 2 out
of 12 in the Human-Mouse SOD1 Chimera
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Human-Mouse SOD1 Chimera within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Zn155
b:23.7
occ:1.00
|
OD1
|
B:ASP83
|
2.0
|
21.8
|
1.0
|
ND1
|
B:HIS80
|
2.1
|
19.3
|
1.0
|
ND1
|
B:HIS71
|
2.2
|
19.6
|
1.0
|
ND1
|
B:HIS63
|
2.2
|
17.3
|
1.0
|
CG
|
B:ASP83
|
2.7
|
21.1
|
1.0
|
OD2
|
B:ASP83
|
2.8
|
19.8
|
1.0
|
CE1
|
B:HIS80
|
2.9
|
18.8
|
1.0
|
CE1
|
B:HIS71
|
3.1
|
19.2
|
1.0
|
CG
|
B:HIS63
|
3.1
|
16.3
|
1.0
|
CG
|
B:HIS80
|
3.2
|
21.3
|
1.0
|
CE1
|
B:HIS63
|
3.3
|
17.1
|
1.0
|
CB
|
B:HIS63
|
3.3
|
18.1
|
1.0
|
CG
|
B:HIS71
|
3.3
|
20.2
|
1.0
|
CB
|
B:HIS80
|
3.7
|
19.9
|
1.0
|
CB
|
B:HIS71
|
3.8
|
20.9
|
1.0
|
O
|
B:LYS136
|
3.9
|
18.4
|
1.0
|
CA
|
B:HIS71
|
4.0
|
21.7
|
1.0
|
NE2
|
B:HIS80
|
4.1
|
20.2
|
1.0
|
CB
|
B:ASP83
|
4.2
|
18.9
|
1.0
|
CD2
|
B:HIS80
|
4.2
|
21.6
|
1.0
|
NE2
|
B:HIS71
|
4.2
|
19.6
|
1.0
|
CD2
|
B:HIS63
|
4.3
|
17.2
|
1.0
|
NE2
|
B:HIS63
|
4.3
|
15.2
|
1.0
|
CD2
|
B:HIS71
|
4.4
|
19.1
|
1.0
|
N
|
B:HIS80
|
4.5
|
20.1
|
1.0
|
CA
|
B:ASP83
|
4.7
|
19.5
|
1.0
|
CA
|
B:HIS80
|
4.7
|
21.3
|
1.0
|
N
|
B:GLY72
|
4.8
|
20.9
|
1.0
|
CD2
|
B:HIS46
|
4.8
|
18.6
|
1.0
|
CA
|
B:HIS63
|
4.8
|
17.1
|
1.0
|
N
|
B:ASP83
|
4.9
|
19.2
|
1.0
|
C
|
B:LYS136
|
4.9
|
21.7
|
1.0
|
C
|
B:HIS71
|
4.9
|
23.2
|
1.0
|
|
Zinc binding site 3 out
of 12 in 3gtv
Go back to
Zinc Binding Sites List in 3gtv
Zinc binding site 3 out
of 12 in the Human-Mouse SOD1 Chimera
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 3 of Human-Mouse SOD1 Chimera within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Zn155
b:22.7
occ:1.00
|
OD1
|
C:ASP83
|
1.9
|
18.1
|
1.0
|
ND1
|
C:HIS63
|
2.2
|
17.2
|
1.0
|
ND1
|
C:HIS71
|
2.2
|
18.1
|
1.0
|
ND1
|
C:HIS80
|
2.2
|
18.6
|
1.0
|
CG
|
C:ASP83
|
2.8
|
20.2
|
1.0
|
OD2
|
C:ASP83
|
3.0
|
20.7
|
1.0
|
CE1
|
C:HIS71
|
3.0
|
18.9
|
1.0
|
CG
|
C:HIS80
|
3.1
|
20.0
|
1.0
|
CG
|
C:HIS63
|
3.1
|
18.5
|
1.0
|
CE1
|
C:HIS80
|
3.1
|
19.2
|
1.0
|
CE1
|
C:HIS63
|
3.2
|
18.5
|
1.0
|
CG
|
C:HIS71
|
3.3
|
17.6
|
1.0
|
CB
|
C:HIS63
|
3.4
|
18.1
|
1.0
|
CB
|
C:HIS80
|
3.4
|
20.7
|
1.0
|
CB
|
C:HIS71
|
3.8
|
18.1
|
1.0
|
O
|
C:LYS136
|
3.8
|
17.5
|
1.0
|
CA
|
C:HIS71
|
4.0
|
18.1
|
1.0
|
NE2
|
C:HIS80
|
4.2
|
20.5
|
1.0
|
NE2
|
C:HIS71
|
4.2
|
18.3
|
1.0
|
CD2
|
C:HIS80
|
4.2
|
19.4
|
1.0
|
CB
|
C:ASP83
|
4.2
|
18.7
|
1.0
|
CD2
|
C:HIS63
|
4.3
|
19.1
|
1.0
|
NE2
|
C:HIS63
|
4.3
|
17.8
|
1.0
|
CD2
|
C:HIS71
|
4.4
|
18.8
|
1.0
|
N
|
C:HIS80
|
4.6
|
19.8
|
1.0
|
CA
|
C:HIS80
|
4.6
|
20.2
|
1.0
|
CA
|
C:ASP83
|
4.6
|
18.5
|
1.0
|
CD2
|
C:HIS46
|
4.8
|
18.1
|
1.0
|
C
|
C:LYS136
|
4.8
|
19.2
|
1.0
|
N
|
C:GLY72
|
4.9
|
20.1
|
1.0
|
N
|
C:ASP83
|
4.9
|
22.5
|
1.0
|
CA
|
C:HIS63
|
4.9
|
18.9
|
1.0
|
O
|
C:HOH701
|
5.0
|
16.1
|
1.0
|
N
|
C:HIS71
|
5.0
|
19.6
|
1.0
|
C
|
C:HIS71
|
5.0
|
18.5
|
1.0
|
|
Zinc binding site 4 out
of 12 in 3gtv
Go back to
Zinc Binding Sites List in 3gtv
Zinc binding site 4 out
of 12 in the Human-Mouse SOD1 Chimera
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 4 of Human-Mouse SOD1 Chimera within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Zn155
b:23.4
occ:1.00
|
OD1
|
D:ASP83
|
2.0
|
20.2
|
1.0
|
ND1
|
D:HIS80
|
2.2
|
18.8
|
1.0
|
ND1
|
D:HIS71
|
2.2
|
18.1
|
1.0
|
ND1
|
D:HIS63
|
2.3
|
15.6
|
1.0
|
CG
|
D:ASP83
|
2.8
|
20.6
|
1.0
|
OD2
|
D:ASP83
|
2.8
|
20.9
|
1.0
|
CE1
|
D:HIS80
|
3.1
|
19.0
|
1.0
|
CG
|
D:HIS80
|
3.2
|
22.4
|
1.0
|
CE1
|
D:HIS71
|
3.2
|
19.3
|
1.0
|
CE1
|
D:HIS63
|
3.2
|
18.1
|
1.0
|
CG
|
D:HIS71
|
3.2
|
18.9
|
1.0
|
CG
|
D:HIS63
|
3.3
|
16.3
|
1.0
|
CB
|
D:HIS80
|
3.5
|
21.5
|
1.0
|
CB
|
D:HIS71
|
3.5
|
17.3
|
1.0
|
CB
|
D:HIS63
|
3.6
|
18.1
|
1.0
|
O
|
D:LYS136
|
3.8
|
19.4
|
1.0
|
CA
|
D:HIS71
|
3.9
|
17.3
|
1.0
|
CB
|
D:ASP83
|
4.2
|
21.0
|
1.0
|
NE2
|
D:HIS80
|
4.2
|
20.1
|
1.0
|
CD2
|
D:HIS80
|
4.3
|
20.4
|
1.0
|
NE2
|
D:HIS71
|
4.3
|
18.5
|
1.0
|
NE2
|
D:HIS63
|
4.3
|
15.4
|
1.0
|
CD2
|
D:HIS71
|
4.4
|
19.8
|
1.0
|
CD2
|
D:HIS63
|
4.4
|
16.5
|
1.0
|
N
|
D:HIS80
|
4.6
|
23.5
|
1.0
|
CD2
|
D:HIS46
|
4.7
|
17.7
|
1.0
|
CA
|
D:ASP83
|
4.7
|
21.4
|
1.0
|
CA
|
D:HIS80
|
4.7
|
19.6
|
1.0
|
C
|
D:LYS136
|
4.8
|
23.1
|
1.0
|
N
|
D:GLY72
|
4.8
|
19.9
|
1.0
|
O
|
D:HOH162
|
4.8
|
17.8
|
1.0
|
C
|
D:HIS71
|
4.9
|
20.5
|
1.0
|
N
|
D:HIS71
|
4.9
|
18.7
|
1.0
|
N
|
D:ASP83
|
5.0
|
23.6
|
1.0
|
|
Zinc binding site 5 out
of 12 in 3gtv
Go back to
Zinc Binding Sites List in 3gtv
Zinc binding site 5 out
of 12 in the Human-Mouse SOD1 Chimera
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 5 of Human-Mouse SOD1 Chimera within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Zn155
b:31.8
occ:1.00
|
OD1
|
E:ASP83
|
2.0
|
31.8
|
1.0
|
ND1
|
E:HIS63
|
2.2
|
27.3
|
1.0
|
ND1
|
E:HIS80
|
2.2
|
28.0
|
1.0
|
ND1
|
E:HIS71
|
2.4
|
30.0
|
1.0
|
CG
|
E:ASP83
|
3.0
|
32.5
|
1.0
|
CG
|
E:HIS63
|
3.0
|
30.3
|
1.0
|
CE1
|
E:HIS80
|
3.1
|
29.6
|
1.0
|
CE1
|
E:HIS63
|
3.2
|
27.3
|
1.0
|
CB
|
E:HIS63
|
3.2
|
31.7
|
1.0
|
OD2
|
E:ASP83
|
3.2
|
34.1
|
1.0
|
CG
|
E:HIS80
|
3.3
|
28.1
|
1.0
|
CE1
|
E:HIS71
|
3.3
|
30.2
|
1.0
|
CG
|
E:HIS71
|
3.4
|
29.9
|
1.0
|
CB
|
E:HIS80
|
3.7
|
29.1
|
1.0
|
O
|
E:LYS136
|
3.7
|
28.6
|
1.0
|
CB
|
E:HIS71
|
3.7
|
29.3
|
1.0
|
CA
|
E:HIS71
|
4.0
|
29.1
|
1.0
|
CD2
|
E:HIS63
|
4.2
|
30.2
|
1.0
|
NE2
|
E:HIS80
|
4.2
|
31.9
|
1.0
|
NE2
|
E:HIS63
|
4.3
|
30.2
|
1.0
|
CB
|
E:ASP83
|
4.3
|
31.7
|
1.0
|
CD2
|
E:HIS80
|
4.3
|
29.6
|
1.0
|
NE2
|
E:HIS71
|
4.5
|
31.3
|
1.0
|
CD2
|
E:HIS71
|
4.5
|
30.8
|
1.0
|
CA
|
E:ASP83
|
4.7
|
29.0
|
1.0
|
O
|
E:HOH171
|
4.7
|
26.7
|
1.0
|
C
|
E:LYS136
|
4.7
|
30.4
|
1.0
|
CA
|
E:HIS63
|
4.8
|
28.6
|
1.0
|
N
|
E:HIS80
|
4.8
|
30.8
|
1.0
|
N
|
E:GLY72
|
4.8
|
31.3
|
1.0
|
CA
|
E:HIS80
|
4.9
|
30.5
|
1.0
|
N
|
E:ASP83
|
4.9
|
29.3
|
1.0
|
CD2
|
E:HIS46
|
4.9
|
28.9
|
1.0
|
N
|
E:HIS71
|
5.0
|
28.6
|
1.0
|
|
Zinc binding site 6 out
of 12 in 3gtv
Go back to
Zinc Binding Sites List in 3gtv
Zinc binding site 6 out
of 12 in the Human-Mouse SOD1 Chimera
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 6 of Human-Mouse SOD1 Chimera within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Zn155
b:24.1
occ:1.00
|
OD1
|
F:ASP83
|
2.0
|
19.5
|
1.0
|
ND1
|
F:HIS63
|
2.1
|
20.9
|
1.0
|
ND1
|
F:HIS80
|
2.2
|
20.0
|
1.0
|
ND1
|
F:HIS71
|
2.5
|
22.4
|
1.0
|
CG
|
F:ASP83
|
2.8
|
22.5
|
1.0
|
CE1
|
F:HIS63
|
3.1
|
22.7
|
1.0
|
OD2
|
F:ASP83
|
3.1
|
23.5
|
1.0
|
CG
|
F:HIS63
|
3.1
|
22.2
|
1.0
|
CE1
|
F:HIS80
|
3.1
|
21.5
|
1.0
|
CG
|
F:HIS80
|
3.2
|
21.6
|
1.0
|
CE1
|
F:HIS71
|
3.4
|
23.4
|
1.0
|
CB
|
F:HIS63
|
3.4
|
21.5
|
1.0
|
CG
|
F:HIS71
|
3.5
|
21.9
|
1.0
|
CB
|
F:HIS80
|
3.5
|
19.7
|
1.0
|
O
|
F:LYS136
|
3.7
|
24.4
|
1.0
|
CB
|
F:HIS71
|
3.8
|
21.6
|
1.0
|
CA
|
F:HIS71
|
4.0
|
21.1
|
1.0
|
NE2
|
F:HIS63
|
4.2
|
22.3
|
1.0
|
CD2
|
F:HIS63
|
4.2
|
21.3
|
1.0
|
NE2
|
F:HIS80
|
4.2
|
20.4
|
1.0
|
CB
|
F:ASP83
|
4.2
|
20.8
|
1.0
|
CD2
|
F:HIS80
|
4.3
|
21.8
|
1.0
|
NE2
|
F:HIS71
|
4.5
|
24.2
|
1.0
|
CD2
|
F:HIS71
|
4.6
|
22.1
|
1.0
|
N
|
F:HIS80
|
4.7
|
23.0
|
1.0
|
CA
|
F:ASP83
|
4.7
|
22.3
|
1.0
|
CA
|
F:HIS80
|
4.7
|
22.2
|
1.0
|
N
|
F:GLY72
|
4.7
|
26.2
|
1.0
|
C
|
F:LYS136
|
4.8
|
24.3
|
1.0
|
C
|
F:HIS71
|
4.9
|
23.4
|
1.0
|
N
|
F:HIS71
|
4.9
|
23.1
|
1.0
|
N
|
F:ASP83
|
4.9
|
23.1
|
1.0
|
CD2
|
F:HIS46
|
4.9
|
21.3
|
1.0
|
CA
|
F:HIS63
|
4.9
|
20.4
|
1.0
|
|
Zinc binding site 7 out
of 12 in 3gtv
Go back to
Zinc Binding Sites List in 3gtv
Zinc binding site 7 out
of 12 in the Human-Mouse SOD1 Chimera
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 7 of Human-Mouse SOD1 Chimera within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Zn155
b:22.6
occ:1.00
|
OD1
|
G:ASP83
|
2.0
|
18.9
|
1.0
|
ND1
|
G:HIS80
|
2.0
|
20.2
|
1.0
|
ND1
|
G:HIS71
|
2.2
|
20.1
|
1.0
|
ND1
|
G:HIS63
|
2.3
|
16.4
|
1.0
|
CG
|
G:ASP83
|
2.8
|
19.4
|
1.0
|
CE1
|
G:HIS80
|
2.8
|
21.2
|
1.0
|
OD2
|
G:ASP83
|
3.0
|
23.0
|
1.0
|
CG
|
G:HIS80
|
3.0
|
21.0
|
1.0
|
CE1
|
G:HIS71
|
3.0
|
20.1
|
1.0
|
CG
|
G:HIS63
|
3.2
|
18.2
|
1.0
|
CE1
|
G:HIS63
|
3.3
|
18.6
|
1.0
|
CG
|
G:HIS71
|
3.3
|
22.4
|
1.0
|
CB
|
G:HIS63
|
3.4
|
19.7
|
1.0
|
CB
|
G:HIS80
|
3.5
|
20.6
|
1.0
|
CB
|
G:HIS71
|
3.8
|
22.9
|
1.0
|
NE2
|
G:HIS80
|
4.0
|
21.7
|
1.0
|
O
|
G:LYS136
|
4.0
|
21.6
|
1.0
|
CA
|
G:HIS71
|
4.0
|
21.1
|
1.0
|
CD2
|
G:HIS80
|
4.1
|
21.3
|
1.0
|
CB
|
G:ASP83
|
4.2
|
18.9
|
1.0
|
NE2
|
G:HIS71
|
4.2
|
21.4
|
1.0
|
CD2
|
G:HIS63
|
4.4
|
18.2
|
1.0
|
NE2
|
G:HIS63
|
4.4
|
16.3
|
1.0
|
CD2
|
G:HIS71
|
4.4
|
20.2
|
1.0
|
N
|
G:HIS80
|
4.6
|
20.1
|
1.0
|
CA
|
G:ASP83
|
4.7
|
17.6
|
1.0
|
CA
|
G:HIS80
|
4.7
|
18.0
|
1.0
|
N
|
G:GLY72
|
4.7
|
22.2
|
1.0
|
N
|
G:ASP83
|
4.8
|
19.5
|
1.0
|
C
|
G:LYS136
|
4.9
|
22.8
|
1.0
|
CA
|
G:HIS63
|
4.9
|
20.2
|
1.0
|
CD2
|
G:HIS46
|
4.9
|
17.0
|
1.0
|
C
|
G:HIS71
|
5.0
|
22.0
|
1.0
|
|
Zinc binding site 8 out
of 12 in 3gtv
Go back to
Zinc Binding Sites List in 3gtv
Zinc binding site 8 out
of 12 in the Human-Mouse SOD1 Chimera
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 8 of Human-Mouse SOD1 Chimera within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Zn155
b:21.7
occ:1.00
|
OD1
|
H:ASP83
|
2.0
|
19.5
|
1.0
|
ND1
|
H:HIS80
|
2.2
|
18.7
|
1.0
|
ND1
|
H:HIS63
|
2.2
|
18.0
|
1.0
|
ND1
|
H:HIS71
|
2.3
|
20.6
|
1.0
|
CG
|
H:ASP83
|
2.8
|
19.6
|
1.0
|
OD2
|
H:ASP83
|
2.9
|
20.8
|
1.0
|
CE1
|
H:HIS80
|
3.1
|
18.2
|
1.0
|
CE1
|
H:HIS71
|
3.1
|
19.5
|
1.0
|
CG
|
H:HIS80
|
3.1
|
18.8
|
1.0
|
CG
|
H:HIS63
|
3.2
|
19.9
|
1.0
|
CE1
|
H:HIS63
|
3.2
|
18.3
|
1.0
|
CG
|
H:HIS71
|
3.4
|
22.5
|
1.0
|
CB
|
H:HIS63
|
3.4
|
19.2
|
1.0
|
CB
|
H:HIS80
|
3.5
|
21.4
|
1.0
|
CB
|
H:HIS71
|
3.8
|
20.1
|
1.0
|
O
|
H:LYS136
|
3.8
|
21.4
|
1.0
|
CA
|
H:HIS71
|
4.0
|
19.2
|
1.0
|
NE2
|
H:HIS80
|
4.2
|
20.4
|
1.0
|
CB
|
H:ASP83
|
4.2
|
18.8
|
1.0
|
CD2
|
H:HIS80
|
4.2
|
20.7
|
1.0
|
NE2
|
H:HIS71
|
4.3
|
20.4
|
1.0
|
CD2
|
H:HIS63
|
4.3
|
18.5
|
1.0
|
NE2
|
H:HIS63
|
4.3
|
17.6
|
1.0
|
CD2
|
H:HIS71
|
4.4
|
21.1
|
1.0
|
N
|
H:HIS80
|
4.7
|
20.5
|
1.0
|
CA
|
H:HIS80
|
4.7
|
19.4
|
1.0
|
CA
|
H:ASP83
|
4.7
|
19.8
|
1.0
|
N
|
H:GLY72
|
4.7
|
20.4
|
1.0
|
C
|
H:LYS136
|
4.8
|
21.7
|
1.0
|
CA
|
H:HIS63
|
4.9
|
20.3
|
1.0
|
C
|
H:HIS71
|
4.9
|
21.8
|
1.0
|
N
|
H:ASP83
|
4.9
|
19.2
|
1.0
|
N
|
H:HIS71
|
5.0
|
21.0
|
1.0
|
|
Zinc binding site 9 out
of 12 in 3gtv
Go back to
Zinc Binding Sites List in 3gtv
Zinc binding site 9 out
of 12 in the Human-Mouse SOD1 Chimera
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 9 of Human-Mouse SOD1 Chimera within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
I:Zn155
b:24.8
occ:1.00
|
ND1
|
I:HIS80
|
2.0
|
22.1
|
1.0
|
OD1
|
I:ASP83
|
2.0
|
20.8
|
1.0
|
ND1
|
I:HIS71
|
2.2
|
22.2
|
1.0
|
ND1
|
I:HIS63
|
2.2
|
20.8
|
1.0
|
CE1
|
I:HIS80
|
2.8
|
22.9
|
1.0
|
CG
|
I:ASP83
|
2.8
|
22.4
|
1.0
|
CE1
|
I:HIS71
|
3.0
|
18.8
|
1.0
|
OD2
|
I:ASP83
|
3.0
|
22.8
|
1.0
|
CG
|
I:HIS80
|
3.1
|
22.3
|
1.0
|
CG
|
I:HIS63
|
3.1
|
20.8
|
1.0
|
CE1
|
I:HIS63
|
3.2
|
22.8
|
1.0
|
CG
|
I:HIS71
|
3.3
|
23.5
|
1.0
|
CB
|
I:HIS63
|
3.4
|
21.3
|
1.0
|
CB
|
I:HIS80
|
3.6
|
23.2
|
1.0
|
CB
|
I:HIS71
|
3.7
|
22.8
|
1.0
|
O
|
I:LYS136
|
3.8
|
21.4
|
1.0
|
NE2
|
I:HIS80
|
3.9
|
27.4
|
1.0
|
CA
|
I:HIS71
|
4.0
|
23.4
|
1.0
|
CD2
|
I:HIS80
|
4.1
|
24.9
|
1.0
|
NE2
|
I:HIS71
|
4.2
|
21.9
|
1.0
|
CB
|
I:ASP83
|
4.2
|
21.6
|
1.0
|
CD2
|
I:HIS63
|
4.3
|
20.5
|
1.0
|
NE2
|
I:HIS63
|
4.3
|
22.2
|
1.0
|
CD2
|
I:HIS71
|
4.3
|
23.5
|
1.0
|
CA
|
I:ASP83
|
4.7
|
22.9
|
1.0
|
N
|
I:HIS80
|
4.7
|
26.3
|
1.0
|
N
|
I:GLY72
|
4.7
|
23.2
|
1.0
|
CA
|
I:HIS80
|
4.8
|
25.0
|
1.0
|
C
|
I:LYS136
|
4.8
|
23.4
|
1.0
|
N
|
I:ASP83
|
4.8
|
22.0
|
1.0
|
CD2
|
I:HIS46
|
4.9
|
19.0
|
1.0
|
CA
|
I:HIS63
|
4.9
|
21.0
|
1.0
|
C
|
I:HIS71
|
5.0
|
23.7
|
1.0
|
O
|
I:HOH287
|
5.0
|
24.2
|
1.0
|
|
Zinc binding site 10 out
of 12 in 3gtv
Go back to
Zinc Binding Sites List in 3gtv
Zinc binding site 10 out
of 12 in the Human-Mouse SOD1 Chimera
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 10 of Human-Mouse SOD1 Chimera within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
J:Zn155
b:27.4
occ:1.00
|
OD1
|
J:ASP83
|
2.0
|
24.6
|
1.0
|
ND1
|
J:HIS80
|
2.2
|
27.4
|
1.0
|
ND1
|
J:HIS63
|
2.2
|
24.6
|
1.0
|
ND1
|
J:HIS71
|
2.3
|
30.4
|
1.0
|
CG
|
J:ASP83
|
2.8
|
28.5
|
1.0
|
OD2
|
J:ASP83
|
3.0
|
32.8
|
1.0
|
CE1
|
J:HIS71
|
3.0
|
27.3
|
1.0
|
CE1
|
J:HIS80
|
3.1
|
29.2
|
1.0
|
CG
|
J:HIS63
|
3.2
|
23.2
|
1.0
|
CG
|
J:HIS80
|
3.2
|
28.8
|
1.0
|
CE1
|
J:HIS63
|
3.2
|
24.7
|
1.0
|
CB
|
J:HIS63
|
3.4
|
26.1
|
1.0
|
CG
|
J:HIS71
|
3.4
|
28.7
|
1.0
|
CB
|
J:HIS80
|
3.5
|
28.5
|
1.0
|
CB
|
J:HIS71
|
3.9
|
29.8
|
1.0
|
O
|
J:LYS136
|
3.9
|
27.9
|
1.0
|
CB
|
J:ASP83
|
4.2
|
24.6
|
1.0
|
CA
|
J:HIS71
|
4.2
|
29.6
|
1.0
|
NE2
|
J:HIS80
|
4.2
|
31.1
|
1.0
|
NE2
|
J:HIS71
|
4.3
|
29.3
|
1.0
|
CD2
|
J:HIS80
|
4.3
|
30.5
|
1.0
|
CD2
|
J:HIS63
|
4.3
|
22.5
|
1.0
|
NE2
|
J:HIS63
|
4.3
|
25.3
|
1.0
|
CD2
|
J:HIS71
|
4.5
|
31.2
|
1.0
|
CA
|
J:ASP83
|
4.6
|
24.1
|
1.0
|
N
|
J:HIS80
|
4.7
|
29.9
|
1.0
|
CA
|
J:HIS80
|
4.7
|
28.0
|
1.0
|
CD2
|
J:HIS46
|
4.7
|
20.2
|
1.0
|
N
|
J:ASP83
|
4.9
|
27.5
|
1.0
|
N
|
J:GLY72
|
4.9
|
31.6
|
1.0
|
O
|
J:HOH156
|
4.9
|
23.6
|
1.0
|
C
|
J:LYS136
|
4.9
|
29.4
|
1.0
|
O
|
J:GLY72
|
4.9
|
28.6
|
1.0
|
CA
|
J:HIS63
|
4.9
|
25.8
|
1.0
|
|
Reference:
S.V.Seetharaman,
A.B.Taylor,
S.Holloway,
P.J.Hart.
Structures of Mouse SOD1 and Human/Mouse SOD1 Chimeras. Arch.Biochem.Biophys. V. 503 183 2010.
ISSN: ISSN 0003-9861
PubMed: 20727846
DOI: 10.1016/J.ABB.2010.08.014
Page generated: Thu Oct 24 14:00:12 2024
|