Zinc in PDB 3g1p: Crystals Structure of Phnp From E.Coli K-12

The structure of Crystals Structure of Phnp From E.Coli K-12, PDB code: 3g1p was solved by K.Podzelinska, Z.Jia, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	67.00 / 1.40
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	111.650, 75.405, 83.228, 90.00, 126.33, 90.00
R / Rfree (%)	18.6 / 21

The structure of Crystals Structure of Phnp From E.Coli K-12 also contains other interesting chemical elements:

Manganese

(Mn)

4 atoms

The binding sites of Zinc atom in the Crystals Structure of Phnp From E.Coli K-12 (pdb code 3g1p). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystals Structure of Phnp From E.Coli K-12, PDB code: 3g1p:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Crystals Structure of Phnp From E.Coli K-12


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystals Structure of Phnp From E.Coli K-12 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn300 b:14.2 occ:1.00 ND1 A:HIS225 2.1 16.3 1.0 SG A:CYS23 2.3 15.3 1.0 SG A:CYS21 2.3 15.3 1.0 SG A:CYS26 2.3 13.8 1.0 CE1 A:HIS225 3.0 12.6 1.0 CB A:CYS26 3.2 13.9 1.0 CG A:HIS225 3.2 13.6 1.0 CB A:CYS21 3.3 14.8 1.0 CB A:CYS23 3.3 13.9 1.0 CB A:HIS225 3.6 12.2 1.0 N A:CYS23 4.0 15.8 1.0 O A:HOH690 4.0 20.8 1.0 N A:CYS26 4.1 13.2 1.0 NE2 A:HIS225 4.2 14.6 1.0 CA A:CYS23 4.2 15.6 1.0 CA A:CYS26 4.2 13.2 1.0 CD2 A:HIS225 4.3 12.2 1.0 CA A:CYS21 4.5 15.1 1.0 C A:CYS21 4.6 14.9 1.0 O A:HOH694 4.6 30.3 1.0 O A:HOH693 4.6 31.3 1.0 CB A:ALA18 4.7 12.0 1.0 C A:CYS23 4.7 15.3 1.0 O A:CYS21 4.8 14.6 1.0 O A:CYS23 4.8 16.5 1.0 N A:GLU22 4.9 15.7 1.0 N A:ALA18 4.9 11.4 1.0 CA A:HIS225 4.9 12.1 1.0

Zinc binding site 2 out of 2 in the Crystals Structure of Phnp From E.Coli K-12


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystals Structure of Phnp From E.Coli K-12 within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn301 b:10.2 occ:1.00 ND1 B:HIS225 2.1 8.8 1.0 SG B:CYS26 2.3 9.7 1.0 SG B:CYS21 2.3 11.6 1.0 SG B:CYS23 2.3 11.6 1.0 CE1 B:HIS225 3.0 9.9 1.0 CG B:HIS225 3.1 9.0 1.0 CB B:CYS26 3.2 9.9 1.0 CB B:CYS21 3.3 12.8 1.0 CB B:CYS23 3.3 14.3 1.0 CB B:HIS225 3.5 9.3 1.0 N B:CYS23 4.0 14.4 1.0 N B:CYS26 4.1 10.3 1.0 O B:HOH586 4.1 16.1 1.0 NE2 B:HIS225 4.1 9.9 1.0 CA B:CYS23 4.2 13.7 1.0 CD2 B:HIS225 4.2 10.8 1.0 CA B:CYS26 4.3 10.2 1.0 CA B:CYS21 4.5 12.7 1.0 CB B:ALA18 4.5 9.0 1.0 O B:HOH590 4.6 22.1 1.0 O B:HOH587 4.6 22.7 1.0 C B:CYS21 4.6 13.4 1.0 C B:CYS23 4.7 13.2 1.0 O B:CYS23 4.8 12.9 1.0 CA B:HIS225 4.8 8.3 1.0 N B:ALA18 4.9 8.9 1.0 O B:CYS21 4.9 13.8 1.0 N B:GLU22 5.0 14.2 1.0

K.Podzelinska, S.He, M.Wathier, A.Yakunin, M.Proudftoot, B.Hove-Jensen, D.Zechel, Z.Jia. Crystals Structure of Phnp From E.Coli K-12 To Be Published.