Atomistry » Zinc » PDB 3e2d-3eb5 » 3ea6
Atomistry »
  Zinc »
    PDB 3e2d-3eb5 »
      3ea6 »

Zinc in PDB 3ea6: Atomic Resolution of Crystal Structure of Sek

Protein crystallography data

The structure of Atomic Resolution of Crystal Structure of Sek, PDB code: 3ea6 was solved by K.Shi, M.Huseby, P.M.Schlievert, D.H.Ohlendorf, C.A.Earhart, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 0.92
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 46.829, 53.652, 92.940, 90.00, 90.00, 90.00
R / Rfree (%) 10.1 / 12.2

Other elements in 3ea6:

The structure of Atomic Resolution of Crystal Structure of Sek also contains other interesting chemical elements:

Iodine (I) 5 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Atomic Resolution of Crystal Structure of Sek (pdb code 3ea6). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Atomic Resolution of Crystal Structure of Sek, PDB code: 3ea6:

Zinc binding site 1 out of 1 in 3ea6

Go back to Zinc Binding Sites List in 3ea6
Zinc binding site 1 out of 1 in the Atomic Resolution of Crystal Structure of Sek


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Atomic Resolution of Crystal Structure of Sek within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1001

b:8.2
occ:0.14
O A:HOH3240 2.0 31.8 1.0
NE2 A:HIS208 2.0 17.2 1.0
ND1 A:HIS169 2.1 28.5 1.0
OD2 A:ASP210 2.2 25.2 1.0
OD1 A:ASP210 2.7 16.1 1.0
CG A:ASP210 2.8 14.7 1.0
CE1 A:HIS169 2.8 24.6 0.6
CE1 A:HIS208 3.0 17.1 1.0
CD2 A:HIS208 3.0 14.8 1.0
CG A:HIS169 3.0 15.3 1.0
CB A:HIS169 3.5 12.8 1.0
NE2 A:HIS169 3.9 20.6 0.9
ND2 A:ASN98 4.0 24.0 1.0
O A:HOH3241 4.0 32.3 1.0
CD2 A:HIS169 4.0 19.7 0.9
ND1 A:HIS208 4.1 16.5 1.0
CG A:HIS208 4.2 12.7 1.0
CB A:ASP210 4.2 10.9 1.0
O A:HOH3426 4.5 50.0 1.0

Reference:

K.Shi, M.Huseby, P.M.Schlievert, D.H.Ohlendorf, C.A.Earhart. Structural Studies of An Emerging Pyrogenic Superantigen, Sek To Be Published.
Page generated: Wed Dec 16 04:15:20 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy