Zinc in PDB 3e49: Crystal Structure of A Prokaryotic Domain of Unknown Function (DUF849) with A Tim Barrel Fold (BXE_C0966) From Burkholderia Xenovorans LB400 at 1.75 A Resolution

The structure of Crystal Structure of A Prokaryotic Domain of Unknown Function (DUF849) with A Tim Barrel Fold (BXE_C0966) From Burkholderia Xenovorans LB400 at 1.75 A Resolution, PDB code: 3e49 was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.66 / 1.75
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	59.495, 68.275, 83.952, 69.99, 88.07, 72.84
R / Rfree (%)	17.7 / 21.8

The binding sites of Zinc atom in the Crystal Structure of A Prokaryotic Domain of Unknown Function (DUF849) with A Tim Barrel Fold (BXE_C0966) From Burkholderia Xenovorans LB400 at 1.75 A Resolution (pdb code 3e49). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 4 binding sites of Zinc where determined in the Crystal Structure of A Prokaryotic Domain of Unknown Function (DUF849) with A Tim Barrel Fold (BXE_C0966) From Burkholderia Xenovorans LB400 at 1.75 A Resolution, PDB code: 3e49:
Jump to Zinc binding site number: 1; 2; 3; 4;

Zinc binding site 1 out of 4 in the Crystal Structure of A Prokaryotic Domain of Unknown Function (DUF849) with A Tim Barrel Fold (BXE_C0966) From Burkholderia Xenovorans LB400 at 1.75 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of A Prokaryotic Domain of Unknown Function (DUF849) with A Tim Barrel Fold (BXE_C0966) From Burkholderia Xenovorans LB400 at 1.75 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn500 b:32.1 occ:1.00 OE2 A:GLU258 2.2 28.0 1.0 NE2 A:HIS49 2.2 20.7 1.0 NE2 A:HIS51 2.2 27.2 1.0 O A:HOH503 2.4 39.1 1.0 O A:HOH502 2.4 31.4 1.0 O A:HOH504 2.7 44.8 1.0 CD A:GLU258 3.0 27.9 1.0 OE1 A:GLU258 3.1 24.8 1.0 CE1 A:HIS49 3.1 29.6 1.0 CD2 A:HIS49 3.1 23.0 1.0 CE1 A:HIS51 3.2 27.0 1.0 CD2 A:HIS51 3.2 29.0 1.0 NH2 A:ARG254 3.9 27.1 1.0 O A:HOH541 4.0 27.0 1.0 OE2 A:GLU171 4.1 40.0 1.0 ND1 A:HIS49 4.2 34.7 1.0 CG A:HIS49 4.3 29.1 1.0 OG1 A:THR85 4.3 29.4 1.0 ND1 A:HIS51 4.3 27.5 1.0 CG A:HIS51 4.4 25.9 1.0 CG A:GLU258 4.4 23.7 1.0 CB A:THR85 4.5 28.0 1.0 O A:HOH673 4.5 50.5 1.0 CA A:GLY15 4.8 26.0 1.0 CZ A:ARG254 4.9 22.8 1.0 NH1 A:ARG254 4.9 26.5 1.0

Zinc binding site 2 out of 4 in the Crystal Structure of A Prokaryotic Domain of Unknown Function (DUF849) with A Tim Barrel Fold (BXE_C0966) From Burkholderia Xenovorans LB400 at 1.75 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of A Prokaryotic Domain of Unknown Function (DUF849) with A Tim Barrel Fold (BXE_C0966) From Burkholderia Xenovorans LB400 at 1.75 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn500 b:33.5 occ:1.00 O B:HOH508 1.8 22.9 1.0 NE2 B:HIS49 2.0 25.6 1.0 OE2 B:GLU258 2.2 29.9 1.0 NE2 B:HIS51 2.3 23.3 1.0 O B:HOH507 2.3 35.9 1.0 O B:HOH506 2.4 31.4 1.0 CE1 B:HIS49 3.0 33.3 1.0 CD B:GLU258 3.0 29.4 1.0 CD2 B:HIS49 3.0 27.2 1.0 OE1 B:GLU258 3.1 30.0 1.0 CD2 B:HIS51 3.2 31.9 1.0 CE1 B:HIS51 3.2 35.4 1.0 O B:HOH560 3.9 31.8 1.0 NH2 B:ARG254 4.0 31.8 1.0 ND1 B:HIS49 4.1 36.4 1.0 CG B:HIS49 4.2 28.8 1.0 OG1 B:THR85 4.2 33.9 1.0 OE2 B:GLU171 4.2 38.7 1.0 ND1 B:HIS51 4.3 32.8 1.0 CG B:HIS51 4.4 31.9 1.0 CG B:GLU258 4.4 26.7 1.0 CB B:THR85 4.5 32.8 1.0 O B:HOH595 4.8 61.6 1.0 NH1 B:ARG254 4.8 29.3 1.0 CZ B:ARG254 4.9 26.8 1.0 CA B:GLY15 4.9 31.7 1.0

Zinc binding site 3 out of 4 in the Crystal Structure of A Prokaryotic Domain of Unknown Function (DUF849) with A Tim Barrel Fold (BXE_C0966) From Burkholderia Xenovorans LB400 at 1.75 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Crystal Structure of A Prokaryotic Domain of Unknown Function (DUF849) with A Tim Barrel Fold (BXE_C0966) From Burkholderia Xenovorans LB400 at 1.75 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ C:Zn500 b:29.1 occ:1.00 OE2 C:GLU258 2.1 22.9 1.0 NE2 C:HIS51 2.2 23.5 1.0 NE2 C:HIS49 2.3 23.4 1.0 O C:HOH506 2.4 28.2 1.0 O C:HOH507 2.5 30.5 1.0 CD C:GLU258 2.9 15.2 1.0 O C:HOH748 3.0 44.1 1.0 OE1 C:GLU258 3.1 18.5 1.0 CE1 C:HIS51 3.1 23.9 1.0 CD2 C:HIS49 3.2 30.9 1.0 CE1 C:HIS49 3.2 32.0 1.0 CD2 C:HIS51 3.2 19.3 1.0 O C:HOH532 4.0 21.8 1.0 NH2 C:ARG254 4.0 22.2 1.0 OE2 C:GLU171 4.1 42.1 1.0 OG1 C:THR85 4.2 23.8 1.0 ND1 C:HIS49 4.3 33.7 1.0 ND1 C:HIS51 4.3 20.5 1.0 CG C:HIS49 4.3 24.0 1.0 CG C:HIS51 4.3 21.6 1.0 CG C:GLU258 4.4 17.8 1.0 CB C:THR85 4.6 17.6 1.0 O C:HOH674 4.6 45.3 1.0 NH1 C:ARG254 4.8 24.4 1.0 O C:HOH688 4.8 48.0 1.0 CA C:GLY15 4.9 22.3 1.0 CZ C:ARG254 4.9 21.2 1.0

Zinc binding site 4 out of 4 in the Crystal Structure of A Prokaryotic Domain of Unknown Function (DUF849) with A Tim Barrel Fold (BXE_C0966) From Burkholderia Xenovorans LB400 at 1.75 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 4 of Crystal Structure of A Prokaryotic Domain of Unknown Function (DUF849) with A Tim Barrel Fold (BXE_C0966) From Burkholderia Xenovorans LB400 at 1.75 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ D:Zn500 b:27.3 occ:1.00 OE2 D:GLU258 2.2 16.4 1.0 NE2 D:HIS51 2.2 13.9 1.0 NE2 D:HIS49 2.2 23.1 1.0 O D:HOH505 2.3 28.1 1.0 O D:HOH504 2.4 27.4 1.0 O D:HOH506 2.8 42.9 1.0 CD D:GLU258 3.0 17.2 1.0 CE1 D:HIS51 3.1 20.4 1.0 OE1 D:GLU258 3.1 23.6 1.0 CE1 D:HIS49 3.1 29.4 1.0 CD2 D:HIS51 3.2 13.9 1.0 CD2 D:HIS49 3.2 23.0 1.0 O D:HOH529 3.9 22.5 1.0 NH2 D:ARG254 4.0 23.8 1.0 ND1 D:HIS51 4.2 18.2 1.0 OG1 D:THR85 4.2 25.9 1.0 ND1 D:HIS49 4.3 24.5 1.0 OE2 D:GLU171 4.3 37.1 1.0 CG D:HIS51 4.3 15.7 1.0 CG D:HIS49 4.4 21.8 1.0 CG D:GLU258 4.4 19.4 1.0 CB D:THR85 4.5 21.9 1.0 O D:HOH683 4.7 45.5 1.0 CA D:GLY15 4.9 19.1 1.0 NH1 D:ARG254 4.9 23.5 1.0 CZ D:ARG254 4.9 21.3 1.0

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.