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Zinc in PDB 3e2i: Crystal Structure of Thymidine Kinase From S. Aureus

Enzymatic activity of Crystal Structure of Thymidine Kinase From S. Aureus

All present enzymatic activity of Crystal Structure of Thymidine Kinase From S. Aureus:
2.7.1.21;

Protein crystallography data

The structure of Crystal Structure of Thymidine Kinase From S. Aureus, PDB code: 3e2i was solved by R.Lam, K.Johns, K.P.Battaile, V.Romanov, K.Lam, E.F.Pai, N.Y.Chirgadze, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.81 / 2.01
Space group P 42 2 2
Cell size a, b, c (Å), α, β, γ (°) 71.621, 71.621, 96.144, 90.00, 90.00, 90.00
R / Rfree (%) 20.2 / 23.7

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Thymidine Kinase From S. Aureus (pdb code 3e2i). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Thymidine Kinase From S. Aureus, PDB code: 3e2i:

Zinc binding site 1 out of 1 in 3e2i

Go back to Zinc Binding Sites List in 3e2i
Zinc binding site 1 out of 1 in the Crystal Structure of Thymidine Kinase From S. Aureus


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Thymidine Kinase From S. Aureus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn200

b:33.7
occ:1.00
SG A:CYS183 2.2 19.2 1.0
ND1 A:HIS186 2.3 21.9 1.0
SG A:CYS148 2.3 21.8 1.0
SG A:CYS145 2.4 14.2 1.0
CE1 A:HIS186 3.0 22.8 1.0
CB A:CYS145 3.1 13.9 1.0
CG A:HIS186 3.4 21.6 1.0
CB A:CYS148 3.4 19.6 1.0
CB A:CYS183 3.5 18.0 1.0
CB A:HIS186 3.8 20.7 1.0
N A:CYS148 3.8 18.9 1.0
OG A:SER150 4.0 19.3 0.5
N A:CYS183 4.0 16.4 1.0
CA A:CYS148 4.2 19.3 1.0
NE2 A:HIS186 4.2 22.8 1.0
CA A:CYS183 4.3 18.1 1.0
CB A:VAL147 4.3 17.7 1.0
CD2 A:HIS186 4.4 22.3 1.0
CA A:CYS145 4.6 13.6 1.0
N A:HIS186 4.6 21.6 1.0
C A:VAL147 4.8 18.6 1.0
C A:CYS148 4.9 19.5 1.0
CA A:HIS186 4.9 21.1 1.0
CG1 A:VAL147 4.9 17.9 1.0
CA A:VAL147 5.0 17.8 1.0
N A:GLY149 5.0 19.1 1.0
C A:CYS183 5.0 19.4 1.0
O A:CYS183 5.0 19.1 1.0

Reference:

R.Lam, K.Johns, K.P.Battaile, V.Romanov, K.Lam, E.F.Pai, N.Y.Chirgadze. Crystal Structure of Thymidine Kinase From S. Aureus To Be Published.
Page generated: Wed Dec 16 04:14:41 2020

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