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Zinc in PDB 3cr2: X-Ray Structure of Bovine Zn(2+),Ca(2+)-S100B

Protein crystallography data

The structure of X-Ray Structure of Bovine Zn(2+),Ca(2+)-S100B, PDB code: 3cr2 was solved by T.H.Charpentier, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.22 / 1.88
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 34.587, 90.476, 58.301, 90.00, 90.00, 90.00
R / Rfree (%) 21.9 / 26.8

Other elements in 3cr2:

The structure of X-Ray Structure of Bovine Zn(2+),Ca(2+)-S100B also contains other interesting chemical elements:

Calcium (Ca) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the X-Ray Structure of Bovine Zn(2+),Ca(2+)-S100B (pdb code 3cr2). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the X-Ray Structure of Bovine Zn(2+),Ca(2+)-S100B, PDB code: 3cr2:

Zinc binding site 1 out of 1 in 3cr2

Go back to Zinc Binding Sites List in 3cr2
Zinc binding site 1 out of 1 in the X-Ray Structure of Bovine Zn(2+),Ca(2+)-S100B


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of X-Ray Structure of Bovine Zn(2+),Ca(2+)-S100B within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn94

b:50.1
occ:1.00
OE2 A:GLU89 2.0 50.8 1.0
NE2 A:HIS85 2.0 50.9 1.0
CD A:GLU89 2.7 54.7 1.0
OE1 A:GLU89 2.7 55.6 1.0
CD2 A:HIS85 2.9 49.8 1.0
CE1 A:HIS85 3.1 50.4 1.0
CG A:HIS85 4.1 49.9 1.0
ND1 A:HIS85 4.2 49.1 1.0
CG A:GLU89 4.2 53.5 1.0
O A:HOH131 4.6 68.7 1.0

Reference:

T.H.Charpentier, P.T.Wilder, M.A.Liriano, K.M.Varney, E.Pozharski, A.D.Mackerell, A.Coop, E.A.Toth, D.J.Weber. Divalent Metal Ion Complexes of S100B in the Absence and Presence of Pentamidine. J.Mol.Biol. V. 382 56 2008.
ISSN: ISSN 0022-2836
PubMed: 18602402
DOI: 10.1016/J.JMB.2008.06.047
Page generated: Thu Oct 24 11:56:12 2024

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