Zinc in PDB 3chv: Crystal Structure of A Prokaryotic Domain of Unknown Function (DUF849) Member (SPOA0042) From Silicibacter Pomeroyi Dss-3 at 1.45 A Resolution

The structure of Crystal Structure of A Prokaryotic Domain of Unknown Function (DUF849) Member (SPOA0042) From Silicibacter Pomeroyi Dss-3 at 1.45 A Resolution, PDB code: 3chv was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.70 / 1.45
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	68.859, 69.601, 52.331, 90.00, 94.19, 90.00
R / Rfree (%)	13.3 / 15.8

The structure of Crystal Structure of A Prokaryotic Domain of Unknown Function (DUF849) Member (SPOA0042) From Silicibacter Pomeroyi Dss-3 at 1.45 A Resolution also contains other interesting chemical elements:

Chlorine

(Cl)

2 atoms

The binding sites of Zinc atom in the Crystal Structure of A Prokaryotic Domain of Unknown Function (DUF849) Member (SPOA0042) From Silicibacter Pomeroyi Dss-3 at 1.45 A Resolution (pdb code 3chv). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of A Prokaryotic Domain of Unknown Function (DUF849) Member (SPOA0042) From Silicibacter Pomeroyi Dss-3 at 1.45 A Resolution, PDB code: 3chv:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Crystal Structure of A Prokaryotic Domain of Unknown Function (DUF849) Member (SPOA0042) From Silicibacter Pomeroyi Dss-3 at 1.45 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of A Prokaryotic Domain of Unknown Function (DUF849) Member (SPOA0042) From Silicibacter Pomeroyi Dss-3 at 1.45 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn301 b:17.5 occ:1.00 O A:HOH445 1.9 21.3 1.0 O A:ASN283 1.9 16.1 1.0 O A:HOH523 2.0 27.7 1.0 ND1 A:HIS76 2.0 8.3 1.0 C A:ASN283 2.7 24.3 1.0 OXT A:ASN283 2.8 30.3 1.0 CE1 A:HIS76 2.9 10.8 1.0 CG A:HIS76 3.1 10.7 1.0 CB A:HIS76 3.4 10.9 1.0 OD1 A:ASN283 4.0 57.0 1.0 NE2 A:HIS76 4.1 10.3 1.0 CA A:ASN283 4.1 27.4 1.0 O A:HOH503 4.1 25.8 1.0 CD2 A:HIS76 4.2 10.0 1.0 O A:ARG282 4.6 19.5 1.0 CB A:ASN283 4.6 28.9 1.0 CG A:ASN283 4.8 37.7 1.0 N A:ASN283 4.9 24.7 1.0 CA A:HIS76 4.9 10.3 1.0 O A:THR72 5.0 10.6 1.0

Zinc binding site 2 out of 2 in the Crystal Structure of A Prokaryotic Domain of Unknown Function (DUF849) Member (SPOA0042) From Silicibacter Pomeroyi Dss-3 at 1.45 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of A Prokaryotic Domain of Unknown Function (DUF849) Member (SPOA0042) From Silicibacter Pomeroyi Dss-3 at 1.45 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn302 b:6.6 occ:1.00 OE2 A:GLU233 2.0 5.8 1.0 O A:HOH348 2.0 11.5 1.0 NE2 A:HIS53 2.0 6.6 1.0 NE2 A:HIS51 2.0 6.5 1.0 CD A:GLU233 2.8 5.2 1.0 O A:HOH587 2.8 31.2 1.0 OE1 A:GLU233 2.9 5.8 1.0 CE1 A:HIS53 3.0 7.2 1.0 CD2 A:HIS51 3.0 3.5 1.0 CD2 A:HIS53 3.1 5.8 1.0 CE1 A:HIS51 3.1 6.7 1.0 O A:HOH406 3.3 17.6 1.0 O A:HOH491 4.0 25.2 1.0 O A:HOH471 4.1 24.1 1.0 NH2 A:ARG229 4.1 13.2 1.0 ND1 A:HIS53 4.1 8.1 1.0 OG A:SER87 4.1 5.9 0.7 ND1 A:HIS51 4.2 6.5 1.0 CG A:HIS51 4.2 5.8 1.0 CG A:HIS53 4.2 5.0 1.0 CG A:GLU233 4.2 5.6 1.0 O A:HOH507 4.3 26.6 1.0 CB A:SER87 4.3 6.4 0.3 CB A:SER87 4.4 7.3 0.7 NH1 A:ARG229 4.5 7.7 1.0 OE2 A:GLU147 4.7 11.7 0.3 CZ A:ARG229 4.7 8.5 1.0 CA A:GLY17 4.7 5.5 1.0 O A:HOH321 4.8 8.4 1.0 OG A:SER87 4.9 7.3 0.3

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.