Zinc in PDB 3cgh: Crystal Structure of A Susd Homolog (BT_3984) From Bacteroides Thetaiotaomicron Vpi-5482 at 1.70 A Resolution

The structure of Crystal Structure of A Susd Homolog (BT_3984) From Bacteroides Thetaiotaomicron Vpi-5482 at 1.70 A Resolution, PDB code: 3cgh was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	28.04 / 1.70
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	49.780, 125.270, 174.650, 90.00, 90.00, 90.00
R / Rfree (%)	14 / 16.6

The binding sites of Zinc atom in the Crystal Structure of A Susd Homolog (BT_3984) From Bacteroides Thetaiotaomicron Vpi-5482 at 1.70 A Resolution (pdb code 3cgh). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of A Susd Homolog (BT_3984) From Bacteroides Thetaiotaomicron Vpi-5482 at 1.70 A Resolution, PDB code: 3cgh:

Zinc binding site 1 out of 1 in the Crystal Structure of A Susd Homolog (BT_3984) From Bacteroides Thetaiotaomicron Vpi-5482 at 1.70 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of A Susd Homolog (BT_3984) From Bacteroides Thetaiotaomicron Vpi-5482 at 1.70 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn600 b:19.5 occ:0.33 OE2 A:GLU321 2.0 17.1 1.0 ND1 A:HIS344 2.3 17.8 1.0 NE2 A:HIS284 2.4 16.6 1.0 SG A:CYS289 2.4 13.2 1.0 CD A:GLU321 2.6 16.8 1.0 OE1 A:GLU321 2.7 14.8 1.0 CD2 A:HIS284 3.0 19.1 1.0 CB A:CYS289 3.2 13.5 1.0 CE1 A:HIS344 3.2 16.2 1.0 CG A:HIS344 3.2 14.8 1.0 CE1 A:HIS284 3.3 16.2 1.0 O A:HIS344 3.3 14.7 1.0 CB A:HIS344 3.5 13.7 1.0 C A:HIS344 3.9 13.1 1.0 CA A:CYS289 4.0 13.2 1.0 CG A:GLU321 4.0 14.6 1.0 CG A:HIS284 4.1 15.4 1.0 ND1 A:HIS284 4.2 14.1 1.0 CG2 A:VAL279 4.3 17.4 0.5 NE2 A:HIS344 4.3 15.8 1.0 CD2 A:HIS344 4.3 13.8 1.0 CA A:HIS344 4.3 13.1 1.0 O A:HOH646 4.4 17.5 1.0 OG1 A:THR291 4.6 12.0 1.0 N A:LYS345 4.6 12.7 1.0 O A:HOH896 4.8 29.2 1.0 CB A:GLU321 4.9 13.9 1.0 O A:HOH853 4.9 26.2 1.0 CG2 A:THR291 4.9 11.4 1.0 C A:CYS289 5.0 14.1 1.0 CA A:LYS345 5.0 12.2 1.0

C.Bakolitsa, Q.Xu, C.L.Rife, P.Abdubek, T.Astakhova, H.L.Axelrod, D.Carlton, C.Chen, H.J.Chiu, T.Clayton, D.Das, M.C.Deller, L.Duan, K.Ellrott, C.L.Farr, J.Feuerhelm, J.C.Grant, A.Grzechnik, G.W.Han, L.Jaroszewski, K.K.Jin, H.E.Klock, M.W.Knuth, P.Kozbial, S.S.Krishna, A.Kumar, W.W.Lam, D.Marciano, D.Mcmullan, M.D.Miller, A.T.Morse, E.Nigoghossian, A.Nopakun, L.Okach, C.Puckett, R.Reyes, H.J.Tien, C.B.Trame, H.Van Den Bedem, D.Weekes, K.O.Hodgson, J.Wooley, M.A.Elsliger, A.M.Deacon, A.Godzik, S.A.Lesley, I.A.Wilson. Structure of BT_3984, A Member of the Susd/Ragb Family of Nutrient-Binding Molecules. Acta Crystallogr.,Sect.F V. 66 1274 2010.
ISSN: ESSN 1744-3091
PubMed: 20944222
DOI: 10.1107/S1744309110032999