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Atomistry » Zinc » PDB 3blo-3c37 » 3bvw » |
Zinc in PDB 3bvw: Golgi Mannosidase II D204A Catalytic Nucleophile Mutant Complex with Methyl (2-Deoxy-2-Acetamido-Beta-D- Glucopyranosyl)-(1->2)-Alpha-D-Mannopyranosyl- (1->3)- [Alpha-D-Mannopyranosyl-(1->6)-6-Thio-Alpha-D- Mannopyranosyl- (1->6)]-Beta-D-MannopyranosideEnzymatic activity of Golgi Mannosidase II D204A Catalytic Nucleophile Mutant Complex with Methyl (2-Deoxy-2-Acetamido-Beta-D- Glucopyranosyl)-(1->2)-Alpha-D-Mannopyranosyl- (1->3)- [Alpha-D-Mannopyranosyl-(1->6)-6-Thio-Alpha-D- Mannopyranosyl- (1->6)]-Beta-D-Mannopyranoside
All present enzymatic activity of Golgi Mannosidase II D204A Catalytic Nucleophile Mutant Complex with Methyl (2-Deoxy-2-Acetamido-Beta-D- Glucopyranosyl)-(1->2)-Alpha-D-Mannopyranosyl- (1->3)- [Alpha-D-Mannopyranosyl-(1->6)-6-Thio-Alpha-D- Mannopyranosyl- (1->6)]-Beta-D-Mannopyranoside:
3.2.1.114; Protein crystallography data
The structure of Golgi Mannosidase II D204A Catalytic Nucleophile Mutant Complex with Methyl (2-Deoxy-2-Acetamido-Beta-D- Glucopyranosyl)-(1->2)-Alpha-D-Mannopyranosyl- (1->3)- [Alpha-D-Mannopyranosyl-(1->6)-6-Thio-Alpha-D- Mannopyranosyl- (1->6)]-Beta-D-Mannopyranoside, PDB code: 3bvw
was solved by
D.A.Kuntz,
D.R.Rose,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Zinc Binding Sites:
The binding sites of Zinc atom in the Golgi Mannosidase II D204A Catalytic Nucleophile Mutant Complex with Methyl (2-Deoxy-2-Acetamido-Beta-D- Glucopyranosyl)-(1->2)-Alpha-D-Mannopyranosyl- (1->3)- [Alpha-D-Mannopyranosyl-(1->6)-6-Thio-Alpha-D- Mannopyranosyl- (1->6)]-Beta-D-Mannopyranoside
(pdb code 3bvw). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Golgi Mannosidase II D204A Catalytic Nucleophile Mutant Complex with Methyl (2-Deoxy-2-Acetamido-Beta-D- Glucopyranosyl)-(1->2)-Alpha-D-Mannopyranosyl- (1->3)- [Alpha-D-Mannopyranosyl-(1->6)-6-Thio-Alpha-D- Mannopyranosyl- (1->6)]-Beta-D-Mannopyranoside, PDB code: 3bvw: Zinc binding site 1 out of 1 in 3bvwGo back to Zinc Binding Sites List in 3bvw
Zinc binding site 1 out
of 1 in the Golgi Mannosidase II D204A Catalytic Nucleophile Mutant Complex with Methyl (2-Deoxy-2-Acetamido-Beta-D- Glucopyranosyl)-(1->2)-Alpha-D-Mannopyranosyl- (1->3)- [Alpha-D-Mannopyranosyl-(1->6)-6-Thio-Alpha-D- Mannopyranosyl- (1->6)]-Beta-D-Mannopyranoside
Mono view Stereo pair view
Reference:
W.Zhong,
D.A.Kuntz,
B.Ember,
H.Singh,
K.W.Moremen,
D.R.Rose,
G.J.Boons.
Probing the Substrate Specificity of Golgi Alpha-Mannosidase II By Use of Synthetic Oligosaccharides and A Catalytic Nucleophile Mutant. J.Am.Chem.Soc. V. 130 8975 2008.
Page generated: Wed Dec 16 04:09:47 2020
ISSN: ISSN 0002-7863 PubMed: 18558690 DOI: 10.1021/JA711248Y |
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