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Zinc in PDB 2ysj: Solution Structure of the Ring Domain (1-56) From Tripartite Motif-Containing Protein 31

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the Ring Domain (1-56) From Tripartite Motif-Containing Protein 31 (pdb code 2ysj). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Ring Domain (1-56) From Tripartite Motif-Containing Protein 31, PDB code: 2ysj:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2ysj

Go back to Zinc Binding Sites List in 2ysj
Zinc binding site 1 out of 2 in the Solution Structure of the Ring Domain (1-56) From Tripartite Motif-Containing Protein 31


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Ring Domain (1-56) From Tripartite Motif-Containing Protein 31 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:0.0
occ:1.00
SG A:CYS26 2.2 0.0 1.0
SG A:CYS46 2.2 0.0 1.0
SG A:CYS43 2.4 0.0 1.0
SG A:CYS23 2.4 0.0 1.0
HB2 A:CYS46 2.6 0.0 1.0
H A:CYS26 3.0 0.0 1.0
CB A:CYS46 3.0 0.0 1.0
HB3 A:CYS23 3.1 0.0 1.0
HB A:ILE25 3.1 0.0 1.0
HB3 A:CYS43 3.2 0.0 1.0
CB A:CYS23 3.2 0.0 1.0
CB A:CYS43 3.4 0.0 1.0
HB2 A:CYS23 3.4 0.0 1.0
HB3 A:CYS26 3.5 0.0 1.0
H A:CYS43 3.5 0.0 1.0
CB A:CYS26 3.5 0.0 1.0
HB3 A:CYS46 3.7 0.0 1.0
N A:CYS26 3.8 0.0 1.0
H A:CYS46 3.9 0.0 1.0
HD12 A:ILE25 4.1 0.0 1.0
CA A:CYS46 4.1 0.0 1.0
CB A:ILE25 4.2 0.0 1.0
N A:CYS46 4.2 0.0 1.0
HG21 A:ILE25 4.2 0.0 1.0
HB2 A:CYS43 4.2 0.0 1.0
N A:CYS43 4.2 0.0 1.0
HB2 A:LYS45 4.3 0.0 1.0
CA A:CYS26 4.3 0.0 1.0
CA A:CYS43 4.3 0.0 1.0
HB2 A:CYS26 4.4 0.0 1.0
H A:ILE25 4.4 0.0 1.0
O A:CYS43 4.4 0.0 1.0
HA A:CYS46 4.5 0.0 1.0
CG2 A:ILE25 4.6 0.0 1.0
CA A:CYS23 4.7 0.0 1.0
HD2 A:PHE42 4.7 0.0 1.0
HG23 A:ILE25 4.7 0.0 1.0
C A:CYS43 4.7 0.0 1.0
H A:LEU27 4.8 0.0 1.0
C A:ILE25 4.8 0.0 1.0
HB3 A:PHE42 4.8 0.0 1.0
CA A:ILE25 4.9 0.0 1.0
CD1 A:ILE25 4.9 0.0 1.0
HA A:CYS23 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 2ysj

Go back to Zinc Binding Sites List in 2ysj
Zinc binding site 2 out of 2 in the Solution Structure of the Ring Domain (1-56) From Tripartite Motif-Containing Protein 31


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Ring Domain (1-56) From Tripartite Motif-Containing Protein 31 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:0.0
occ:1.00
ND1 A:HIS40 2.0 0.0 1.0
SG A:CYS63 2.3 0.0 1.0
SG A:CYS60 2.4 0.0 1.0
SG A:CYS38 2.4 0.0 1.0
CE1 A:HIS40 2.7 0.0 1.0
HE1 A:HIS40 2.8 0.0 1.0
H A:CYS63 3.0 0.0 1.0
H A:HIS40 3.1 0.0 1.0
HB2 A:CYS38 3.1 0.0 1.0
HB3 A:CYS60 3.1 0.0 1.0
CG A:HIS40 3.1 0.0 1.0
HB2 A:LEU62 3.1 0.0 1.0
HB2 A:HIS40 3.2 0.0 1.0
CB A:CYS60 3.2 0.0 1.0
CB A:CYS38 3.4 0.0 1.0
HB2 A:CYS60 3.4 0.0 1.0
CB A:CYS63 3.5 0.0 1.0
N A:CYS63 3.6 0.0 1.0
HB2 A:CYS63 3.6 0.0 1.0
CB A:HIS40 3.7 0.0 1.0
HE1 A:PHE42 3.8 0.0 1.0
HD13 A:ILE36 3.9 0.0 1.0
NE2 A:HIS40 3.9 0.0 1.0
N A:HIS40 4.0 0.0 1.0
CA A:CYS63 4.0 0.0 1.0
HD13 A:LEU62 4.0 0.0 1.0
HA A:CYS63 4.1 0.0 1.0
HB3 A:CYS38 4.1 0.0 1.0
CD2 A:HIS40 4.1 0.0 1.0
O A:CYS38 4.2 0.0 1.0
C A:CYS38 4.2 0.0 1.0
CB A:LEU62 4.2 0.0 1.0
CA A:CYS38 4.4 0.0 1.0
CA A:HIS40 4.4 0.0 1.0
H A:LEU62 4.4 0.0 1.0
HB3 A:CYS63 4.4 0.0 1.0
C A:LEU62 4.5 0.0 1.0
HB3 A:HIS40 4.6 0.0 1.0
HZ A:PHE42 4.7 0.0 1.0
N A:GLY39 4.7 0.0 1.0
CA A:CYS60 4.7 0.0 1.0
HG13 A:ILE36 4.7 0.0 1.0
HB3 A:LEU62 4.7 0.0 1.0
HE2 A:HIS40 4.7 0.0 1.0
CA A:LEU62 4.8 0.0 1.0
CE1 A:PHE42 4.8 0.0 1.0
CD1 A:ILE36 4.8 0.0 1.0
HG A:LEU62 4.9 0.0 1.0
N A:LEU62 4.9 0.0 1.0
HA3 A:GLY39 4.9 0.0 1.0
CD1 A:LEU62 4.9 0.0 1.0
HA A:CYS38 4.9 0.0 1.0
CG A:LEU62 5.0 0.0 1.0
HD2 A:PRO61 5.0 0.0 1.0
HD11 A:ILE36 5.0 0.0 1.0

Reference:

X.R.Qin, T.Nagashima, F.Hayashi, S.Yokoyama. Solution Structure of the Ring Domain (1-56) From Tripartite Motif-Containing Protein 31 To Be Published.
Page generated: Thu Oct 24 10:23:27 2024

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