Zinc in PDB 2x9l: Crystal Structure of Deacetylase-Bog Complex in Biosynthesis Pathway of Teicoplanin.

The structure of Crystal Structure of Deacetylase-Bog Complex in Biosynthesis Pathway of Teicoplanin., PDB code: 2x9l was solved by H.C.Chan, Y.T.Huang, S.Y.Lyu, C.J.Huang, Y.S.Li, Y.C.Liu, C.C.Chou, M.D.Tsai, T.L.Li, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	27.031 / 1.73
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	42.452, 64.028, 50.342, 90.00, 99.06, 90.00
R / Rfree (%)	18.57 / 21.72

The binding sites of Zinc atom in the Crystal Structure of Deacetylase-Bog Complex in Biosynthesis Pathway of Teicoplanin. (pdb code 2x9l). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Deacetylase-Bog Complex in Biosynthesis Pathway of Teicoplanin., PDB code: 2x9l:

Zinc binding site 1 out of 1 in the Crystal Structure of Deacetylase-Bog Complex in Biosynthesis Pathway of Teicoplanin.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Deacetylase-Bog Complex in Biosynthesis Pathway of Teicoplanin. within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn3001 b:30.1 occ:1.00 ND1 A:HIS16 2.2 13.0 1.0 OD2 A:ASP19 2.2 15.0 1.0 NE2 A:HIS164 2.2 14.6 1.0 O A:HOH2253 2.4 28.4 1.0 OD1 A:ASP19 2.5 15.6 1.0 CG A:ASP19 2.7 15.1 1.0 CE1 A:HIS164 3.1 15.8 1.0 CG A:HIS16 3.1 12.0 1.0 CE1 A:HIS16 3.2 13.7 1.0 CD2 A:HIS164 3.3 14.2 1.0 CB A:HIS16 3.4 14.7 1.0 OH A:TYR190 3.8 30.6 1.0 O3 A:BOG4001 4.1 16.8 1.0 N A:HIS16 4.2 10.7 1.0 CB A:ASP19 4.2 11.8 1.0 ND1 A:HIS164 4.2 13.6 1.0 NE2 A:HIS16 4.3 13.0 1.0 CD2 A:HIS16 4.3 12.4 1.0 CG A:HIS164 4.4 13.8 1.0 CB A:PRO15 4.4 11.2 1.0 C2 A:BOG4001 4.4 18.8 1.0 CA A:HIS16 4.4 9.4 1.0 OD1 A:ASP18 4.5 18.9 1.0 O2 A:BOG4001 4.5 19.4 1.0 C3 A:BOG4001 4.6 15.4 1.0 CE1 A:TYR190 4.6 23.5 1.0 CZ A:TYR190 4.6 28.1 1.0 CG A:PRO15 4.8 14.5 1.0 O A:HOH2174 4.9 16.5 1.0

H.C.Chan, Y.T.Huang, S.Y.Lyu, C.J.Huang, Y.S.Li, Y.C.Liu, C.C.Chou, M.D.Tsai, T.L.Li. Regioselective Deacetylation Based on Teicoplanin- Complexed ORF2* Crystal Structures. Mol.Biosyst. V. 7 1224 2011.
ISSN: ISSN 1742-206X
PubMed: 21267472
DOI: 10.1039/C0MB00320D