Zinc in PDB 2wg4: Crystal Structure of the Complex Between Human Hedgehog-Interacting Protein Hip and Sonic Hedgehog Without Calcium

The structure of Crystal Structure of the Complex Between Human Hedgehog-Interacting Protein Hip and Sonic Hedgehog Without Calcium, PDB code: 2wg4 was solved by B.Bishop, A.R.Aricescu, K.Harlos, C.A.O'callaghan, E.Y.Jones, C.Siebold, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.84 / 3.15
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	88.055, 88.055, 171.946, 90.00, 90.00, 120.00
R / Rfree (%)	23.4 / 29.2

The structure of Crystal Structure of the Complex Between Human Hedgehog-Interacting Protein Hip and Sonic Hedgehog Without Calcium also contains other interesting chemical elements:

Sodium

(Na)

4 atoms

The binding sites of Zinc atom in the Crystal Structure of the Complex Between Human Hedgehog-Interacting Protein Hip and Sonic Hedgehog Without Calcium (pdb code 2wg4). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of the Complex Between Human Hedgehog-Interacting Protein Hip and Sonic Hedgehog Without Calcium, PDB code: 2wg4:

Zinc binding site 1 out of 1 in the Crystal Structure of the Complex Between Human Hedgehog-Interacting Protein Hip and Sonic Hedgehog Without Calcium


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Complex Between Human Hedgehog-Interacting Protein Hip and Sonic Hedgehog Without Calcium within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn1190 b:44.0 occ:1.00 ND1 A:HIS183 2.0 46.1 1.0 NE2 A:HIS141 2.0 50.0 1.0 OD1 A:ASP148 2.0 48.5 1.0 OD2 B:ASP383 2.1 62.3 1.0 CE1 A:HIS141 2.8 49.2 1.0 CG B:ASP383 2.8 59.5 1.0 CE1 A:HIS183 2.9 47.0 1.0 CG A:ASP148 2.9 49.4 1.0 OD1 B:ASP383 3.0 61.6 1.0 OD2 A:ASP148 3.1 51.7 1.0 CG A:HIS183 3.1 46.9 1.0 CD2 A:HIS141 3.2 50.0 1.0 CB A:HIS183 3.6 45.5 1.0 ND1 A:HIS141 4.0 51.5 1.0 NE2 A:HIS183 4.0 44.3 1.0 CD2 A:HIS183 4.2 53.6 1.0 CG A:HIS141 4.2 52.4 1.0 CB B:ASP383 4.3 57.3 1.0 CB A:ASP148 4.3 50.6 1.0 CE1 A:HIS181 4.3 52.9 1.0 CA A:HIS183 4.3 46.1 1.0 O A:VAL147 4.5 51.1 1.0 C A:VAL147 4.6 53.0 1.0 N A:ASP148 4.6 52.0 1.0 CA A:ASP148 4.7 51.9 1.0 CB A:ALA146 4.9 50.0 1.0 CE1 A:HIS135 5.0 65.4 1.0

B.Bishop, A.R.Aricescu, K.Harlos, C.A.O'callaghan, E.Y.Jones, C.Siebold. Structural Insights Into Hedgehog Ligand Sequestration By the Human Hedgehog-Interacting Protein Hip Nat.Struct.Mol.Biol. V. 16 698 2009.
ISSN: ISSN 1545-9993
PubMed: 19561611
DOI: 10.1038/NSMB.1607