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Zinc in PDB 2vy5: U11-48K Chhc Zn-Finger Protein Domain

Zinc Binding Sites:

The binding sites of Zinc atom in the U11-48K Chhc Zn-Finger Protein Domain (pdb code 2vy5). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the U11-48K Chhc Zn-Finger Protein Domain, PDB code: 2vy5:

Zinc binding site 1 out of 1 in 2vy5

Go back to Zinc Binding Sites List in 2vy5
Zinc binding site 1 out of 1 in the U11-48K Chhc Zn-Finger Protein Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of U11-48K Chhc Zn-Finger Protein Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1088

b:0.0
occ:1.00
HE2 A:MET66 2.0 0.0 1.0
ND1 A:HIS64 2.0 0.0 1.0
HE1 A:HIS74 2.0 0.0 1.0
ND1 A:HIS74 2.0 0.0 1.0
HB2 A:CYS78 2.2 0.0 1.0
CE1 A:HIS74 2.3 0.0 1.0
SG A:CYS78 2.3 0.0 1.0
SG A:CYS58 2.3 0.0 1.0
CB A:CYS78 2.6 0.0 1.0
HB3 A:CYS78 2.8 0.0 1.0
CE1 A:HIS64 2.9 0.0 1.0
CG A:HIS64 2.9 0.0 1.0
CE A:MET66 2.9 0.0 1.0
HE1 A:HIS64 3.2 0.0 1.0
HB3 A:HIS64 3.2 0.0 1.0
HE3 A:MET66 3.2 0.0 1.0
HE1 A:MET66 3.3 0.0 1.0
HB3 A:CYS58 3.3 0.0 1.0
HB2 A:HIS64 3.3 0.0 1.0
CG A:HIS74 3.4 0.0 1.0
CB A:HIS64 3.4 0.0 1.0
CB A:CYS58 3.4 0.0 1.0
HB2 A:ASP61 3.5 0.0 1.0
HB2 A:CYS58 3.6 0.0 1.0
NE2 A:HIS74 3.6 0.0 1.0
NE2 A:HIS64 3.9 0.0 1.0
HB2 A:TYR60 3.9 0.0 1.0
CD2 A:HIS64 3.9 0.0 1.0
HB2 A:HIS74 4.0 0.0 1.0
HD2 A:TYR60 4.0 0.0 1.0
CA A:CYS78 4.1 0.0 1.0
CD2 A:HIS74 4.1 0.0 1.0
H A:ASP61 4.2 0.0 1.0
HE2 A:HIS74 4.2 0.0 1.0
CB A:HIS74 4.3 0.0 1.0
SD A:MET66 4.3 0.0 1.0
HA A:CYS78 4.3 0.0 1.0
CB A:ASP61 4.5 0.0 1.0
H A:CYS78 4.6 0.0 1.0
O A:HIS74 4.6 0.0 1.0
OD2 A:ASP61 4.7 0.0 1.0
HE2 A:HIS64 4.7 0.0 1.0
H A:CYS58 4.7 0.0 1.0
CA A:CYS58 4.8 0.0 1.0
C A:HIS74 4.8 0.0 1.0
N A:CYS78 4.8 0.0 1.0
HB3 A:ASP61 4.9 0.0 1.0
CA A:HIS64 4.9 0.0 1.0
HD2 A:HIS64 4.9 0.0 1.0
C A:CYS78 4.9 0.0 1.0
N A:ASP61 5.0 0.0 1.0
HA A:MET75 5.0 0.0 1.0
CB A:TYR60 5.0 0.0 1.0

Reference:

H.Tidow, A.Andreeva, T.J.Rutherford, A.R.Fersht. Solution Structure of the U11-48K Chhc Zinc-Finger Domain That Specifically Binds the 5' Splice Site of U12-Type Introns. Structure V. 17 294 2009.
ISSN: ISSN 0969-2126
PubMed: 19217400
DOI: 10.1016/J.STR.2008.11.013
Page generated: Wed Dec 16 03:56:36 2020

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