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Zinc in PDB 2vrd: The Structure of the Zinc Finger From the Human Spliceosomal Protein U1C

Zinc Binding Sites:

The binding sites of Zinc atom in the The Structure of the Zinc Finger From the Human Spliceosomal Protein U1C (pdb code 2vrd). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the The Structure of the Zinc Finger From the Human Spliceosomal Protein U1C, PDB code: 2vrd:

Zinc binding site 1 out of 1 in 2vrd

Go back to Zinc Binding Sites List in 2vrd
Zinc binding site 1 out of 1 in the The Structure of the Zinc Finger From the Human Spliceosomal Protein U1C


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The Structure of the Zinc Finger From the Human Spliceosomal Protein U1C within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1062

b:0.0
occ:1.00
NE2 A:HIS24 2.0 0.0 1.0
NE2 A:HIS30 2.0 0.0 1.0
SG A:CYS9 2.3 0.0 1.0
SG A:CYS6 2.3 0.0 1.0
CD2 A:HIS24 2.9 0.0 1.0
CD2 A:HIS30 3.0 0.0 1.0
CE1 A:HIS30 3.1 0.0 1.0
HB2 A:CYS9 3.1 0.0 1.0
CE1 A:HIS24 3.1 0.0 1.0
HD2 A:HIS24 3.1 0.0 1.0
HD2 A:HIS30 3.2 0.0 1.0
CB A:CYS9 3.3 0.0 1.0
CB A:CYS6 3.4 0.0 1.0
HE1 A:HIS30 3.4 0.0 1.0
HE1 A:HIS24 3.4 0.0 1.0
HB3 A:CYS6 3.4 0.0 1.0
HB2 A:CYS6 3.6 0.0 1.0
HB2 A:TYR8 3.7 0.0 1.0
H A:CYS9 3.8 0.0 1.0
HB3 A:CYS9 4.0 0.0 1.0
N A:CYS9 4.1 0.0 1.0
CG A:HIS24 4.2 0.0 1.0
CG A:HIS30 4.2 0.0 1.0
ND1 A:HIS24 4.2 0.0 1.0
ND1 A:HIS30 4.2 0.0 1.0
CA A:CYS9 4.4 0.0 1.0
CB A:TYR8 4.6 0.0 1.0
HG23 A:THR11 4.7 0.0 1.0
CA A:CYS6 4.7 0.0 1.0
HA A:CYS9 4.7 0.0 1.0
HB3 A:TYR8 4.8 0.0 1.0
C A:TYR8 4.9 0.0 1.0

Reference:

Y.Muto, D.Pomeranz-Krummel, C.Oubridge, H.Hernandez, C.Robinson, D.Neuhaus, K.Nagai. The Structure and Biochemical Properties of the Human Spliceosomal Protein U1C J.Mol.Biol. V. 341 185 2004.
ISSN: ISSN 0022-2836
PubMed: 15312772
DOI: 10.1016/J.JMB.2004.04.078
Page generated: Thu Oct 17 04:31:41 2024

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