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Zinc in PDB 2rc5: Refined Structure of Fnr From Leptospira Interrogans

Enzymatic activity of Refined Structure of Fnr From Leptospira Interrogans

All present enzymatic activity of Refined Structure of Fnr From Leptospira Interrogans:
1.18.1.2;

Protein crystallography data

The structure of Refined Structure of Fnr From Leptospira Interrogans, PDB code: 2rc5 was solved by A.S.Nascimento, D.L.Catalano-Dupuy, I.Polikarpov, E.A.Ceccarelli, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.90 / 2.43
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 65.112, 111.832, 89.913, 90.00, 92.76, 90.00
R / Rfree (%) 22.5 / 25.5

Zinc Binding Sites:

The binding sites of Zinc atom in the Refined Structure of Fnr From Leptospira Interrogans (pdb code 2rc5). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Refined Structure of Fnr From Leptospira Interrogans, PDB code: 2rc5:

Zinc binding site 1 out of 1 in 2rc5

Go back to Zinc Binding Sites List in 2rc5
Zinc binding site 1 out of 1 in the Refined Structure of Fnr From Leptospira Interrogans


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Refined Structure of Fnr From Leptospira Interrogans within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn317

b:43.1
occ:1.00
OE1 B:GLU124 1.9 47.9 1.0
NE2 A:HIS224 2.0 24.9 1.0
OE1 A:GLU189 2.4 24.8 1.0
OE2 A:GLU189 2.5 26.7 1.0
O B:HOH546 2.6 36.5 1.0
CD A:GLU189 2.7 25.1 1.0
CD B:GLU124 2.7 46.0 1.0
O A:HOH488 2.7 31.6 1.0
CE1 A:HIS224 2.9 25.4 1.0
OE2 B:GLU124 2.9 44.5 1.0
CD2 A:HIS224 3.1 25.9 1.0
O A:LEU188 3.7 27.6 1.0
CG A:GLU189 4.1 25.0 1.0
CG B:GLU124 4.1 45.7 1.0
ND1 A:HIS224 4.1 27.0 1.0
O A:HOH570 4.1 38.8 1.0
CG A:HIS224 4.2 27.7 1.0
C A:LEU188 4.3 27.6 1.0
CB A:LEU188 4.5 27.9 1.0
CA A:GLU189 4.6 25.0 1.0
CB B:GLU124 4.7 45.7 1.0
CB A:GLU189 4.8 24.9 1.0
N A:GLU189 4.8 25.0 1.0
O A:HOH546 4.8 39.3 1.0

Reference:

A.S.Nascimento, D.L.Catalano-Dupuy, A.Bernardes, M.O.Neto, M.A.Santos, E.A.Ceccarelli, I.Polikarpov. Crystal Structures of Leptospira Interrogans Fad-Containing Ferredoxin-Nadp+ Reductase and Its Complex with Nadp+. Bmc Struct.Biol. V. 7 69 2007.
ISSN: ESSN 1472-6807
PubMed: 17958910
DOI: 10.1186/1472-6807-7-69
Page generated: Thu Oct 17 03:45:42 2024

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