Zinc in PDB 2qpx: Crystal Structure of Putative Metal-Dependent Hydrolase (YP_805737.1) From Lactobacillus Casei Atcc 334 at 1.40 A Resolution

The structure of Crystal Structure of Putative Metal-Dependent Hydrolase (YP_805737.1) From Lactobacillus Casei Atcc 334 at 1.40 A Resolution, PDB code: 2qpx was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.03 / 1.40
Space group	I 2 3
Cell size a, b, c (Å), α, β, γ (°)	142.170, 142.170, 142.170, 90.00, 90.00, 90.00
R / Rfree (%)	13.4 / 16.2

The binding sites of Zinc atom in the Crystal Structure of Putative Metal-Dependent Hydrolase (YP_805737.1) From Lactobacillus Casei Atcc 334 at 1.40 A Resolution (pdb code 2qpx). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of Putative Metal-Dependent Hydrolase (YP_805737.1) From Lactobacillus Casei Atcc 334 at 1.40 A Resolution, PDB code: 2qpx:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Crystal Structure of Putative Metal-Dependent Hydrolase (YP_805737.1) From Lactobacillus Casei Atcc 334 at 1.40 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Putative Metal-Dependent Hydrolase (YP_805737.1) From Lactobacillus Casei Atcc 334 at 1.40 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn376 b:14.9 occ:0.70 OQ1 A:KCX166 2.1 19.1 1.0 O A:HOH465 2.1 29.4 1.0 NE2 A:HIS19 2.1 16.3 1.0 OD1 A:ASP317 2.1 15.8 1.0 NE2 A:HIS17 2.1 15.2 1.0 CX A:KCX166 2.9 18.7 1.0 CE1 A:HIS19 3.0 17.1 1.0 CE1 A:HIS17 3.0 15.3 1.0 CG A:ASP317 3.1 15.8 1.0 CD2 A:HIS19 3.1 17.7 1.0 CD2 A:HIS17 3.1 15.6 1.0 OQ2 A:KCX166 3.2 21.5 1.0 ZN A:ZN377 3.4 17.5 0.3 OD2 A:ASP317 3.5 22.1 1.0 O A:HOH582 3.8 35.3 1.0 O A:HOH759 3.8 48.4 1.0 NZ A:KCX166 4.0 17.4 1.0 CE1 A:HIS263 4.0 24.0 1.0 O A:HOH707 4.1 48.3 1.0 NE2 A:HIS263 4.1 22.3 1.0 ND1 A:HIS19 4.2 17.2 1.0 ND1 A:HIS17 4.2 15.1 1.0 CG A:HIS17 4.2 13.9 1.0 CG A:HIS19 4.3 14.9 1.0 CB A:ASP317 4.4 15.4 1.0 OD2 A:ASP100 4.6 19.3 1.0 CA A:ASP317 4.8 12.8 1.0 O A:HOH604 4.9 36.7 1.0 O A:ASP317 4.9 17.4 1.0

Zinc binding site 2 out of 2 in the Crystal Structure of Putative Metal-Dependent Hydrolase (YP_805737.1) From Lactobacillus Casei Atcc 334 at 1.40 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of Putative Metal-Dependent Hydrolase (YP_805737.1) From Lactobacillus Casei Atcc 334 at 1.40 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn377 b:17.5 occ:0.30 OQ2 A:KCX166 1.9 21.5 1.0 NE2 A:HIS263 2.0 22.3 1.0 ND1 A:HIS227 2.0 25.4 1.0 O A:HOH465 2.3 29.4 1.0 CD2 A:HIS263 2.9 23.0 1.0 CE1 A:HIS227 2.9 24.0 1.0 CX A:KCX166 2.9 18.7 1.0 OH A:TYR171 3.0 42.9 1.0 CE1 A:HIS263 3.1 24.0 1.0 CG A:HIS227 3.1 17.6 1.0 OQ1 A:KCX166 3.3 19.1 1.0 ZN A:ZN376 3.4 14.9 0.7 CB A:HIS227 3.5 15.8 1.0 CE2 A:TYR171 3.9 40.0 1.0 CZ A:TYR171 3.9 36.9 1.0 OD2 A:ASP317 4.0 22.1 1.0 O A:HOH707 4.0 48.3 1.0 CG A:HIS263 4.0 20.4 1.0 NE2 A:HIS227 4.1 21.5 1.0 ND1 A:HIS263 4.1 21.5 1.0 NZ A:KCX166 4.1 17.4 1.0 CA A:HIS227 4.1 13.9 1.0 CD2 A:HIS227 4.2 18.1 1.0 OD1 A:ASP317 4.3 15.8 1.0 NE2 A:HIS17 4.4 15.2 1.0 CG A:ASP317 4.5 15.8 1.0 O A:HOH582 4.6 35.3 1.0 CE A:KCX166 4.6 19.3 1.0 CD1 A:LEU262 4.7 16.0 1.0 CB A:LEU262 4.9 14.4 1.0

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.