Zinc in PDB 2qje: Crystal Structure of the Complex of Bovine C-Lobe with Amygdalin at 2.3A Resolution

The structure of Crystal Structure of the Complex of Bovine C-Lobe with Amygdalin at 2.3A Resolution, PDB code: 2qje was solved by R.Mir, R.Jain, S.Kumar, M.Sinha, N.Singh, S.Sharma, P.Kaur, A.Srinivasan, A.Bhushan, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	39.30 / 2.30
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	63.368, 50.368, 65.969, 90.00, 107.71, 90.00
R / Rfree (%)	22.3 / 22.7

The structure of Crystal Structure of the Complex of Bovine C-Lobe with Amygdalin at 2.3A Resolution also contains other interesting chemical elements:

Iron

(Fe)

1 atom

The binding sites of Zinc atom in the Crystal Structure of the Complex of Bovine C-Lobe with Amygdalin at 2.3A Resolution (pdb code 2qje). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of the Complex of Bovine C-Lobe with Amygdalin at 2.3A Resolution, PDB code: 2qje:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Crystal Structure of the Complex of Bovine C-Lobe with Amygdalin at 2.3A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Complex of Bovine C-Lobe with Amygdalin at 2.3A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn690 b:37.7 occ:1.00 OE2 A:GLU659 2.2 29.7 1.0 OE1 A:GLU659 2.6 30.6 1.0 CD A:GLU659 2.7 30.0 1.0 O A:GLY653 3.9 41.0 1.0 CG A:GLU659 4.2 29.6 1.0 O A:ARG654 4.5 36.3 1.0 CA A:PRO655 4.8 32.1 1.0 CB A:GLU659 4.9 28.8 1.0

Zinc binding site 2 out of 2 in the Crystal Structure of the Complex of Bovine C-Lobe with Amygdalin at 2.3A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of the Complex of Bovine C-Lobe with Amygdalin at 2.3A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn691 b:39.4 occ:1.00 NE2 A:HIS588 2.2 29.1 1.0 O A:HOH909 2.2 49.1 1.0 O A:HOH872 2.5 65.7 1.0 CE1 A:HIS588 3.1 28.0 1.0 CD2 A:HIS588 3.2 28.6 1.0 ND1 A:HIS588 4.2 28.5 1.0 CG A:HIS588 4.3 28.5 1.0 CG1 A:VAL591 4.7 27.0 1.0 O A:HOH726 4.7 32.2 1.0

R.Mir, R.Jain, S.Kumar, M.Sinha, N.Singh, S.Sharma, P.Kaur, A.Srinivasan, A.Bhushan, T.P.Singh. Crystal Structure of the Complex of Bovine C-Lobe with Amygdalin at 2.3A Resolution To Be Published.