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Zinc in PDB 2o51: Crystal Structure of Bovine C-Lobe with Fructose at 3.0 A Resolution

Protein crystallography data

The structure of Crystal Structure of Bovine C-Lobe with Fructose at 3.0 A Resolution, PDB code: 2o51 was solved by R.Mir, A.S.Ethayathulla, M.Sinha, N.Singh, S.Sharma, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.84 / 3.00
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 63.578, 50.332, 66.080, 90.00, 107.94, 90.00
R / Rfree (%) 18 / 20.2

Other elements in 2o51:

The structure of Crystal Structure of Bovine C-Lobe with Fructose at 3.0 A Resolution also contains other interesting chemical elements:

Iron (Fe) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Bovine C-Lobe with Fructose at 3.0 A Resolution (pdb code 2o51). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of Bovine C-Lobe with Fructose at 3.0 A Resolution, PDB code: 2o51:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2o51

Go back to Zinc Binding Sites List in 2o51
Zinc binding site 1 out of 2 in the Crystal Structure of Bovine C-Lobe with Fructose at 3.0 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Bovine C-Lobe with Fructose at 3.0 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn696

b:23.1
occ:1.00
O A:HOH874 2.2 28.2 1.0
OE2 A:GLU659 2.3 16.4 1.0
OE1 A:GLU659 2.5 17.3 1.0
CD A:GLU659 2.7 16.9 1.0
O A:GLY653 4.1 29.6 1.0
CG A:GLU659 4.2 16.7 1.0
O A:ARG654 4.5 30.9 1.0
CA A:PRO655 4.8 26.9 1.0
CG2 A:THR656 4.9 28.9 1.0
N A:THR656 4.9 26.7 1.0
CB A:GLU659 4.9 16.5 1.0

Zinc binding site 2 out of 2 in 2o51

Go back to Zinc Binding Sites List in 2o51
Zinc binding site 2 out of 2 in the Crystal Structure of Bovine C-Lobe with Fructose at 3.0 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of Bovine C-Lobe with Fructose at 3.0 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn697

b:26.5
occ:1.00
NE2 A:HIS588 2.3 15.0 1.0
O A:HOH873 2.3 2.9 1.0
O A:HOH872 2.5 27.4 1.0
O A:HOH871 2.5 69.4 1.0
CE1 A:HIS588 3.1 15.0 1.0
CD2 A:HIS588 3.3 16.5 1.0
ND1 A:HIS588 4.3 16.5 1.0
CG A:HIS588 4.4 15.6 1.0
CG1 A:VAL591 4.9 24.3 1.0
O A:HOH761 5.0 25.2 1.0

Reference:

R.Mir, A.S.Ethayathulla, M.Sinha, N.Singh, S.Sharma, P.Kaur, T.P.Singh. Crystal Structure of Bovine C-Lobe with Fructose at 3.0 A Resolution To Be Published.
Page generated: Wed Dec 16 03:45:22 2020

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