Zinc in PDB 2n94: uc(Nmr) Structure of Yeast BCD1 Protein Zinc Finger

The binding sites of Zinc atom in the uc(Nmr) Structure of Yeast BCD1 Protein Zinc Finger (pdb code 2n94). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the uc(Nmr) Structure of Yeast BCD1 Protein Zinc Finger, PDB code: 2n94:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the uc(Nmr) Structure of Yeast BCD1 Protein Zinc Finger


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of uc(Nmr) Structure of Yeast BCD1 Protein Zinc Finger within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn101 b:0.0 occ:1.00 SG A:CYS5 2.3 0.0 1.0 SG A:CYS29 2.3 0.0 1.0 SG A:CYS8 2.3 0.0 1.0 SG A:CYS25 2.3 0.0 1.0 H A:CYS25 2.9 0.0 1.0 H A:CYS8 3.0 0.0 1.0 HB3 A:CYS25 3.2 0.0 1.0 HB3 A:CYS8 3.3 0.0 1.0 HB2 A:CYS29 3.3 0.0 1.0 CB A:CYS5 3.3 0.0 1.0 CB A:CYS29 3.4 0.0 1.0 HB3 A:CYS5 3.4 0.0 1.0 CB A:CYS25 3.4 0.0 1.0 CB A:CYS8 3.4 0.0 1.0 HB2 A:CYS5 3.4 0.0 1.0 HB A:VAL7 3.5 0.0 1.0 HB3 A:CYS29 3.6 0.0 1.0 N A:CYS25 3.8 0.0 1.0 N A:CYS8 3.8 0.0 1.0 H A:GLY9 3.9 0.0 1.0 CA A:CYS8 4.2 0.0 1.0 H A:SER26 4.2 0.0 1.0 CA A:CYS25 4.2 0.0 1.0 HB2 A:CYS25 4.2 0.0 1.0 HB2 A:CYS8 4.3 0.0 1.0 HA A:THR24 4.4 0.0 1.0 HD13 A:ILE10 4.4 0.0 1.0 H A:VAL7 4.5 0.0 1.0 N A:GLY9 4.6 0.0 1.0 CB A:VAL7 4.6 0.0 1.0 HB A:THR24 4.6 0.0 1.0 HG12 A:VAL7 4.7 0.0 1.0 N A:SER26 4.8 0.0 1.0 CA A:CYS29 4.8 0.0 1.0 CA A:CYS5 4.8 0.0 1.0 C A:CYS8 4.8 0.0 1.0 HG13 A:ILE10 4.9 0.0 1.0 C A:THR24 4.9 0.0 1.0 C A:VAL7 4.9 0.0 1.0 C A:CYS25 4.9 0.0 1.0 HG21 A:THR24 5.0 0.0 1.0 H A:CYS29 5.0 0.0 1.0

Zinc binding site 2 out of 2 in the uc(Nmr) Structure of Yeast BCD1 Protein Zinc Finger


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of uc(Nmr) Structure of Yeast BCD1 Protein Zinc Finger within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn102 b:0.0 occ:1.00 NE2 A:HIS33 2.0 0.0 1.0 SG A:CYS39 2.3 0.0 1.0 SG A:CYS20 2.3 0.0 1.0 SG A:CYS17 2.3 0.0 1.0 CE1 A:HIS33 2.7 0.0 1.0 CD2 A:HIS33 2.9 0.0 1.0 HE1 A:HIS33 3.0 0.0 1.0 H A:CYS20 3.1 0.0 1.0 HB2 A:CYS20 3.2 0.0 1.0 HD2 A:HIS33 3.3 0.0 1.0 HB2 A:ARG19 3.3 0.0 1.0 HB3 A:CYS39 3.4 0.0 1.0 CB A:CYS39 3.4 0.0 1.0 CB A:CYS20 3.4 0.0 1.0 CB A:CYS17 3.4 0.0 1.0 HB2 A:CYS17 3.5 0.0 1.0 HB2 A:CYS39 3.5 0.0 1.0 HB3 A:CYS17 3.6 0.0 1.0 ND1 A:HIS33 3.7 0.0 1.0 CG A:HIS33 3.8 0.0 1.0 N A:CYS20 3.8 0.0 1.0 HG2 A:LYS34 4.0 0.0 1.0 HB3 A:CYS20 4.2 0.0 1.0 H A:ARG19 4.2 0.0 1.0 CB A:ARG19 4.2 0.0 1.0 CA A:CYS20 4.3 0.0 1.0 HG13 A:VAL22 4.3 0.0 1.0 HB3 A:ARG19 4.3 0.0 1.0 HE2 A:LYS34 4.3 0.0 1.0 HA2 A:GLY41 4.3 0.0 1.0 HD1 A:HIS33 4.5 0.0 1.0 HG11 A:VAL22 4.7 0.0 1.0 HD3 A:ARG19 4.8 0.0 1.0 CA A:CYS39 4.8 0.0 1.0 HA A:CYS20 4.8 0.0 1.0 C A:ARG19 4.8 0.0 1.0 CA A:CYS17 4.8 0.0 1.0 HD2 A:PRO18 4.9 0.0 1.0 CG A:LYS34 4.9 0.0 1.0 HG3 A:LYS34 4.9 0.0 1.0 CA A:ARG19 4.9 0.0 1.0 N A:ARG19 5.0 0.0 1.0 HA3 A:GLY41 5.0 0.0 1.0

B.Bragantini, D.Tiotiu, B.Rothe, J.M.Saliou, H.Marty, S.Cianferani, B.Charpentier, M.Quinternet, X.Manival. Functional and Structural Insights of the Zinc-Finger Hit Protein Family Members Involved in Box C/D Snornp Biogenesis. J.Mol.Biol. V. 428 2488 2016.
ISSN: ISSN 0022-2836
PubMed: 27139642
DOI: 10.1016/J.JMB.2016.04.028