Zinc in PDB 2n1a: Docked Structure Between SUMO1 and Zz-Domain From Cbp

All present enzymatic activity of Docked Structure Between SUMO1 and Zz-Domain From Cbp:
2.3.1.48;

The binding sites of Zinc atom in the Docked Structure Between SUMO1 and Zz-Domain From Cbp (pdb code 2n1a). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Docked Structure Between SUMO1 and Zz-Domain From Cbp, PDB code: 2n1a:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Docked Structure Between SUMO1 and Zz-Domain From Cbp


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Docked Structure Between SUMO1 and Zz-Domain From Cbp within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn300 b:0.0 occ:1.00 SG B:CYS231 2.3 0.0 1.0 SG B:CYS234 2.3 0.0 1.0 SG B:CYS212 2.3 0.0 1.0 SG B:CYS209 2.3 0.0 1.0 HB2 B:GLU211 3.0 0.0 1.0 H B:CYS212 3.0 0.0 1.0 H B:CYS234 3.1 0.0 1.0 H B:CYS231 3.3 0.0 1.0 HB2 B:CYS234 3.3 0.0 1.0 HB3 B:CYS231 3.5 0.0 1.0 CB B:CYS234 3.5 0.0 1.0 HB3 B:CYS209 3.5 0.0 1.0 CB B:CYS209 3.6 0.0 1.0 CB B:CYS231 3.6 0.0 1.0 CB B:CYS212 3.6 0.0 1.0 HB3 B:CYS212 3.6 0.0 1.0 N B:CYS212 3.6 0.0 1.0 HB2 B:ASN233 3.6 0.0 1.0 HB2 B:CYS209 3.9 0.0 1.0 H B:GLU211 4.0 0.0 1.0 N B:CYS234 4.0 0.0 1.0 CB B:GLU211 4.0 0.0 1.0 N B:CYS231 4.1 0.0 1.0 CA B:CYS212 4.2 0.0 1.0 H B:HIS214 4.2 0.0 1.0 HB3 B:GLU211 4.2 0.0 1.0 HB3 B:CYS234 4.2 0.0 1.0 HB2 B:CYS231 4.4 0.0 1.0 CA B:CYS234 4.4 0.0 1.0 C B:GLU211 4.4 0.0 1.0 CA B:CYS231 4.4 0.0 1.0 H B:LYS213 4.4 0.0 1.0 HB2 B:CYS212 4.5 0.0 1.0 CA B:GLU211 4.6 0.0 1.0 H B:ASN233 4.6 0.0 1.0 N B:GLU211 4.6 0.0 1.0 HA B:LEU230 4.6 0.0 1.0 CB B:ASN233 4.7 0.0 1.0 HB3 B:HIS214 4.8 0.0 1.0 CA B:CYS209 4.8 0.0 1.0 N B:LYS213 4.9 0.0 1.0 C B:CYS212 4.9 0.0 1.0 HA B:CYS234 4.9 0.0 1.0 O B:HIS214 5.0 0.0 1.0 C B:CYS209 5.0 0.0 1.0

Zinc binding site 2 out of 2 in the Docked Structure Between SUMO1 and Zz-Domain From Cbp


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Docked Structure Between SUMO1 and Zz-Domain From Cbp within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn301 b:0.0 occ:1.00 ND1 B:HIS242 2.0 0.0 1.0 NE2 B:HIS240 2.0 0.0 1.0 SG B:CYS225 2.3 0.0 1.0 SG B:CYS222 2.3 0.0 1.0 CE1 B:HIS240 2.9 0.0 1.0 CE1 B:HIS242 2.9 0.0 1.0 CG B:HIS242 2.9 0.0 1.0 CD2 B:HIS240 3.0 0.0 1.0 HB2 B:HIS242 3.0 0.0 1.0 HE1 B:HIS240 3.2 0.0 1.0 HE1 B:HIS242 3.2 0.0 1.0 HD2 B:HIS240 3.3 0.0 1.0 CB B:HIS242 3.3 0.0 1.0 H B:CYS225 3.4 0.0 1.0 HB2 B:CYS225 3.4 0.0 1.0 HB3 B:HIS242 3.5 0.0 1.0 CB B:CYS225 3.6 0.0 1.0 HB B:VAL224 3.6 0.0 1.0 CB B:CYS222 3.6 0.0 1.0 HB3 B:CYS222 3.7 0.0 1.0 HB2 B:CYS222 3.8 0.0 1.0 CD2 B:HIS242 4.0 0.0 1.0 NE2 B:HIS242 4.0 0.0 1.0 ND1 B:HIS240 4.0 0.0 1.0 N B:CYS225 4.1 0.0 1.0 CG B:HIS240 4.1 0.0 1.0 HB3 B:CYS225 4.3 0.0 1.0 CA B:CYS225 4.5 0.0 1.0 HD2 B:TYR228 4.5 0.0 1.0 CB B:VAL224 4.6 0.0 1.0 CA B:HIS242 4.8 0.0 1.0 HG12 B:VAL224 4.9 0.0 1.0 CA B:CYS222 4.9 0.0 1.0 HD1 B:HIS240 4.9 0.0 1.0 HE2 B:HIS242 5.0 0.0 1.0 CD2 B:TYR228 5.0 0.0 1.0

C.Diehl, M.Akke, S.Bekker-Jensen, N.Mailand, W.Streicher, M.Wikstrom. Structural Analysis of A Complex Between Small Ubiquitin-Like Modifier 1 (SUMO1) and the Zz Domain of Creb-Binding Protein (Cbp/P300) Reveals A New Interaction Surface on Sumo. J.Biol.Chem. V. 291 12658 2016.
ISSN: ISSN 0021-9258
PubMed: 27129204
DOI: 10.1074/JBC.M115.711325