Zinc in PDB 2mzz: uc(Nmr) Structure of APOBEC3G Ntd Variant, Sntd

The binding sites of Zinc atom in the uc(Nmr) Structure of APOBEC3G Ntd Variant, Sntd (pdb code 2mzz). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the uc(Nmr) Structure of APOBEC3G Ntd Variant, Sntd, PDB code: 2mzz:

Zinc binding site 1 out of 1 in the uc(Nmr) Structure of APOBEC3G Ntd Variant, Sntd


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of uc(Nmr) Structure of APOBEC3G Ntd Variant, Sntd within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:0.0 occ:1.00 ND1 A:HIS54 2.0 0.0 1.0 SG A:CYS88 2.3 0.0 1.0 SG A:CYS85 2.3 0.0 1.0 HD2 A:PRO55 2.6 0.0 1.0 HE3 A:MET92 2.7 0.0 1.0 HB3 A:HIS54 2.8 0.0 1.0 HD21 A:LEU24 2.8 0.0 1.0 HD22 A:LEU24 2.8 0.0 1.0 HA A:CYS85 2.9 0.0 1.0 CG A:HIS54 3.0 0.0 1.0 CE1 A:HIS54 3.0 0.0 1.0 CD2 A:LEU24 3.1 0.0 1.0 HD23 A:LEU24 3.1 0.0 1.0 HE1 A:HIS54 3.3 0.0 1.0 HB3 A:CYS88 3.3 0.0 1.0 CB A:HIS54 3.3 0.0 1.0 CB A:CYS88 3.3 0.0 1.0 CB A:CYS85 3.4 0.0 1.0 CE A:MET92 3.5 0.0 1.0 HB2 A:CYS85 3.6 0.0 1.0 HB2 A:CYS88 3.6 0.0 1.0 CA A:CYS85 3.6 0.0 1.0 HE2 A:MET92 3.7 0.0 1.0 CD A:PRO55 3.7 0.0 1.0 HB2 A:HIS54 3.7 0.0 1.0 HE1 A:MET92 3.7 0.0 1.0 HZ3 A:TRP78 3.8 0.0 1.0 HG12 A:ILE80 3.9 0.0 1.0 HG2 A:PRO55 3.9 0.0 1.0 CD2 A:HIS54 4.1 0.0 1.0 HD3 A:PRO55 4.1 0.0 1.0 NE2 A:HIS54 4.1 0.0 1.0 HG3 A:GLU56 4.1 0.0 1.0 CZ3 A:TRP78 4.2 0.0 1.0 CG A:PRO55 4.3 0.0 1.0 HE3 A:TRP78 4.4 0.0 1.0 HB3 A:CYS85 4.4 0.0 1.0 HD13 A:ILE80 4.4 0.0 1.0 CE3 A:TRP78 4.5 0.0 1.0 CG A:LEU24 4.6 0.0 1.0 N A:CYS85 4.6 0.0 1.0 HG22 A:ILE80 4.6 0.0 1.0 HG A:SER83 4.6 0.0 1.0 N A:PRO55 4.7 0.0 1.0 CA A:HIS54 4.7 0.0 1.0 CA A:CYS88 4.7 0.0 1.0 O A:CYS85 4.7 0.0 1.0 C A:CYS85 4.7 0.0 1.0 HD13 A:LEU24 4.7 0.0 1.0 HG3 A:PRO55 4.7 0.0 1.0 HB3 A:LEU24 4.7 0.0 1.0 HD11 A:ILE80 4.8 0.0 1.0 CG1 A:ILE80 4.8 0.0 1.0 CD1 A:ILE80 4.9 0.0 1.0 HG2 A:GLU56 4.9 0.0 1.0 CG A:GLU56 4.9 0.0 1.0 HG22 A:VAL47 5.0 0.0 1.0 C A:CYS88 5.0 0.0 1.0

T.Kono, E.M.Luengas, M.Shigematu, S.M.D.Shandilya, J.Zhang, L.Chen, M.Hara, C.A.Schiffer, R.S.Harris, H.Matsuo. Structure of the Vif-Binding Domain of the Antiviral Enzyme APOBEC3G Nat.Struct.Mol.Biol. 2015.
ISSN: ESSN 1545-9985