Zinc in PDB 2kwq: MCM10 C-Terminal Dna Binding Domain

The binding sites of Zinc atom in the MCM10 C-Terminal Dna Binding Domain (pdb code 2kwq). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the MCM10 C-Terminal Dna Binding Domain, PDB code: 2kwq:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the MCM10 C-Terminal Dna Binding Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of MCM10 C-Terminal Dna Binding Domain within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn843 b:0.0 occ:1.00 ND1 A:HIS787 2.2 0.0 1.0 SG A:CYS771 2.5 0.0 1.0 SG A:CYS782 2.5 0.0 1.0 SG A:CYS768 2.5 0.0 1.0 HE2 A:TYR773 3.0 0.0 1.0 HB2 A:CYS771 3.1 0.0 1.0 CE1 A:HIS787 3.2 0.0 1.0 HE1 A:HIS787 3.3 0.0 1.0 CG A:HIS787 3.3 0.0 1.0 CB A:CYS771 3.4 0.0 1.0 H A:CYS771 3.5 0.0 1.0 HB A:THR770 3.5 0.0 1.0 HB3 A:CYS782 3.5 0.0 1.0 HH A:TYR773 3.6 0.0 1.0 CB A:CYS782 3.6 0.0 1.0 HB2 A:HIS787 3.7 0.0 1.0 CB A:CYS768 3.7 0.0 1.0 HB3 A:HIS787 3.7 0.0 1.0 HB3 A:CYS768 3.8 0.0 1.0 HB2 A:CYS768 3.8 0.0 1.0 CB A:HIS787 3.8 0.0 1.0 CE2 A:TYR773 3.9 0.0 1.0 HA A:CYS782 4.0 0.0 1.0 N A:CYS771 4.0 0.0 1.0 HB3 A:CYS771 4.2 0.0 1.0 OH A:TYR773 4.3 0.0 1.0 NE2 A:HIS787 4.3 0.0 1.0 CA A:CYS771 4.4 0.0 1.0 CA A:CYS782 4.4 0.0 1.0 CD2 A:HIS787 4.4 0.0 1.0 HB2 A:CYS782 4.5 0.0 1.0 CZ A:TYR773 4.5 0.0 1.0 CB A:THR770 4.5 0.0 1.0 H A:THR770 4.7 0.0 1.0 HD2 A:TYR773 4.7 0.0 1.0 CD2 A:TYR773 4.7 0.0 1.0 HG21 A:THR770 4.8 0.0 1.0 C A:THR770 4.8 0.0 1.0 HD1 A:PHE789 4.8 0.0 1.0 HE3 A:LYS779 4.8 0.0 1.0 HE2 A:LYS779 4.9 0.0 1.0 HE1 A:PHE789 4.9 0.0 1.0 HA A:CYS771 5.0 0.0 1.0

Zinc binding site 2 out of 2 in the MCM10 C-Terminal Dna Binding Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of MCM10 C-Terminal Dna Binding Domain within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn844 b:0.0 occ:1.00 SG A:CYS801 2.4 0.0 1.0 SG A:CYS803 2.4 0.0 1.0 SG A:CYS818 2.4 0.0 1.0 SG A:CYS821 2.4 0.0 1.0 H A:CYS821 3.3 0.0 1.0 HB2 A:CYS818 3.3 0.0 1.0 CB A:CYS818 3.4 0.0 1.0 HB3 A:CYS801 3.4 0.0 1.0 HB3 A:CYS803 3.4 0.0 1.0 CB A:CYS801 3.5 0.0 1.0 H A:CYS803 3.5 0.0 1.0 HB3 A:ASN805 3.5 0.0 1.0 HB3 A:CYS818 3.6 0.0 1.0 HB A:THR820 3.6 0.0 1.0 CB A:CYS803 3.6 0.0 1.0 CB A:CYS821 3.7 0.0 1.0 HB3 A:CYS821 3.7 0.0 1.0 HD13 A:LEU823 3.9 0.0 1.0 HD12 A:LEU823 3.9 0.0 1.0 HB2 A:ASN805 3.9 0.0 1.0 HB2 A:CYS801 3.9 0.0 1.0 N A:CYS821 4.0 0.0 1.0 HD21 A:ASN805 4.0 0.0 1.0 H A:ASN805 4.2 0.0 1.0 CB A:ASN805 4.2 0.0 1.0 HB2 A:CYS803 4.3 0.0 1.0 N A:CYS803 4.4 0.0 1.0 H A:THR820 4.4 0.0 1.0 CA A:CYS821 4.4 0.0 1.0 CD1 A:LEU823 4.4 0.0 1.0 H A:GLY822 4.5 0.0 1.0 CA A:CYS803 4.6 0.0 1.0 HB2 A:CYS821 4.6 0.0 1.0 CB A:THR820 4.6 0.0 1.0 HG A:LEU823 4.8 0.0 1.0 HD2 A:PRO802 4.8 0.0 1.0 CA A:CYS818 4.8 0.0 1.0 CA A:CYS801 4.8 0.0 1.0 HG21 A:THR820 4.8 0.0 1.0 C A:THR820 4.9 0.0 1.0 ND2 A:ASN805 4.9 0.0 1.0 H A:LEU823 4.9 0.0 1.0 HG2 A:PRO802 5.0 0.0 1.0 HA A:CYS818 5.0 0.0 1.0 C A:CYS801 5.0 0.0 1.0

P.D.Robertson, B.Chagot, W.J.Chazin, B.F.Eichman. Solution uc(Nmr) Structure of the C-Terminal Dna Binding Domain of MCM10 Reveals A Conserved Mcm Motif. J.Biol.Chem. V. 285 22942 2010.
ISSN: ISSN 0021-9258
PubMed: 20489205
DOI: 10.1074/JBC.M110.131276