Zinc in PDB 2ku3: Solution Structure of BRD1 PHD1 Finger

The binding sites of Zinc atom in the Solution Structure of BRD1 PHD1 Finger (pdb code 2ku3). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of BRD1 PHD1 Finger, PDB code: 2ku3:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Solution Structure of BRD1 PHD1 Finger


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of BRD1 PHD1 Finger within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn63 b:1.0 occ:1.00 SG A:CYS27 2.3 2.6 1.0 SG A:CYS30 2.3 5.1 1.0 SG A:CYS51 2.3 2.0 1.0 SG A:CYS54 2.3 1.9 1.0 HB2 A:CYS54 2.7 1.6 1.0 H A:CYS51 2.8 1.1 1.0 CB A:CYS54 3.1 1.4 1.0 HB3 A:CYS27 3.1 2.2 1.0 H A:CYS30 3.1 2.5 1.0 HB3 A:CYS51 3.1 1.6 1.0 CB A:CYS27 3.3 1.9 1.0 CB A:CYS51 3.3 1.3 1.0 HB3 A:CYS30 3.4 4.3 1.0 CB A:CYS30 3.5 4.0 1.0 H A:LEU32 3.6 1.8 1.0 HB2 A:CYS27 3.6 1.7 1.0 N A:CYS51 3.6 1.0 1.0 HB3 A:LEU32 3.8 2.3 1.0 HB2 A:LEU32 3.8 2.3 1.0 H A:ASN31 3.8 2.3 1.0 HB3 A:CYS54 3.8 1.6 1.0 H A:CYS54 3.9 1.4 1.0 N A:CYS30 3.9 2.7 1.0 CA A:CYS51 4.1 1.1 1.0 H A:MET29 4.1 1.9 1.0 HA A:LEU50 4.1 1.2 1.0 CA A:CYS54 4.2 1.3 1.0 H A:ASP28 4.2 2.0 1.0 HB2 A:CYS51 4.2 1.6 1.0 CA A:CYS30 4.2 3.2 1.0 N A:CYS54 4.3 1.4 1.0 CB A:LEU32 4.3 1.8 1.0 HA A:CYS54 4.3 1.4 1.0 HB2 A:CYS30 4.4 4.3 1.0 HD12 A:LEU32 4.4 2.5 1.0 HB3 A:MET29 4.4 2.6 1.0 N A:ASN31 4.5 2.5 1.0 N A:LEU32 4.5 1.7 1.0 HZ3 A:TRP49 4.6 1.9 1.0 CA A:CYS27 4.7 1.6 1.0 HB3 A:HIS53 4.7 2.0 1.0 C A:LEU50 4.7 1.0 1.0 C A:CYS30 4.8 3.0 1.0 HA A:CYS27 4.8 1.7 1.0 C A:CYS51 4.8 1.1 1.0 HD12 A:LEU50 4.9 2.0 1.0 O A:CYS51 4.9 1.1 1.0 CA A:LEU50 4.9 1.1 1.0 HA A:CYS51 4.9 1.1 1.0 N A:MET29 4.9 1.8 1.0 HE3 A:TRP49 5.0 1.8 1.0

Zinc binding site 2 out of 2 in the Solution Structure of BRD1 PHD1 Finger


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of BRD1 PHD1 Finger within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn64 b:1.0 occ:1.00 ND1 A:HIS35 2.0 1.3 1.0 SG A:CYS10 2.3 1.1 1.0 SG A:CYS13 2.3 1.9 1.0 SG A:CYS38 2.3 1.5 1.0 CE1 A:HIS35 2.7 1.6 1.0 HE1 A:HIS35 2.7 2.0 1.0 H A:CYS13 3.1 1.2 1.0 HB3 A:CYS13 3.1 2.0 1.0 HB3 A:CYS10 3.1 1.0 1.0 HB2 A:CYS38 3.2 1.2 1.0 CB A:CYS10 3.2 1.1 1.0 CG A:HIS35 3.2 0.9 1.0 CB A:CYS13 3.3 1.7 1.0 H A:HIS35 3.3 0.8 1.0 CB A:CYS38 3.3 0.9 1.0 HB2 A:CYS10 3.3 1.1 1.0 HB2 A:HIS35 3.3 1.0 1.0 HB A:ILE12 3.5 1.1 1.0 HB3 A:CYS38 3.6 1.1 1.0 N A:CYS13 3.7 1.3 1.0 CB A:HIS35 3.8 0.8 1.0 HD21 A:ASN22 3.9 3.3 1.0 NE2 A:HIS35 4.0 1.5 1.0 H A:ASP15 4.0 1.9 1.0 CA A:CYS13 4.0 1.4 1.0 HG22 A:ILE12 4.1 1.7 1.0 HB3 A:ASP15 4.1 2.4 1.0 HB2 A:CYS13 4.2 2.0 1.0 N A:HIS35 4.2 0.7 1.0 CD2 A:HIS35 4.2 1.2 1.0 H A:ILE12 4.3 1.2 1.0 CB A:ILE12 4.5 1.2 1.0 O A:ASP15 4.5 2.3 1.0 HA A:VAL34 4.6 0.9 1.0 H A:MET14 4.6 1.7 1.0 C A:ILE12 4.6 1.4 1.0 CA A:CYS10 4.6 1.1 1.0 C A:CYS13 4.7 1.6 1.0 CA A:HIS35 4.7 0.7 1.0 CA A:CYS38 4.7 0.9 1.0 HB3 A:HIS35 4.7 0.9 1.0 CG2 A:ILE12 4.7 1.3 1.0 ND2 A:ASN22 4.7 3.1 1.0 N A:ILE12 4.8 1.3 1.0 HE2 A:HIS35 4.8 1.8 1.0 HD12 A:ILE12 4.8 1.7 1.0 CA A:ILE12 4.8 1.3 1.0 N A:MET14 4.9 1.7 1.0 N A:ASP15 4.9 1.8 1.0 HB2 A:ASP15 4.9 2.2 1.0 HA A:CYS38 4.9 1.1 1.0 CB A:ASP15 4.9 2.1 1.0 HG11 A:VAL34 4.9 1.4 1.0 HA A:CYS13 4.9 1.7 1.0 HG23 A:ILE12 5.0 1.7 1.0 HD22 A:ASN22 5.0 3.7 1.0

S.Qin, J.Zhang, J.Wu, Y.Shi. Solution Structure of BRD1 PHD1 Finger To Be Published.