Zinc in PDB 2ko8: The Structure of Anti-Trap

The binding sites of Zinc atom in the The Structure of Anti-Trap (pdb code 2ko8). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 3 binding sites of Zinc where determined in the The Structure of Anti-Trap, PDB code: 2ko8:
Jump to Zinc binding site number: 1; 2; 3;

Zinc binding site 1 out of 3 in the The Structure of Anti-Trap


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The Structure of Anti-Trap within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn54 b:0.0 occ:1.00 SG A:CYS15 2.0 0.0 1.0 SG A:CYS29 2.0 0.0 1.0 SG A:CYS26 2.0 0.0 1.0 SG A:CYS12 2.3 0.0 1.0 HB3 A:CYS12 3.2 0.0 1.0 CB A:CYS12 3.3 0.0 1.0 CB A:CYS26 3.3 0.0 1.0 HB3 A:CYS26 3.3 0.0 1.0 HB2 A:CYS12 3.4 0.0 1.0 HB2 A:CYS26 3.5 0.0 1.0 CB A:CYS29 3.6 0.0 1.0 HD12 A:ILE21 3.8 0.0 1.0 CB A:CYS15 3.8 0.0 1.0 HB3 A:CYS29 3.8 0.0 1.0 H A:CYS15 3.8 0.0 1.0 H A:CYS29 3.9 0.0 1.0 HG12 A:ILE21 3.9 0.0 1.0 HD2 A:PRO13 4.0 0.0 1.0 HG22 A:ILE35 4.1 0.0 1.0 O A:CYS29 4.1 0.0 1.0 O A:GLU20 4.2 0.0 1.0 HB3 A:CYS15 4.2 0.0 1.0 HB2 A:CYS15 4.2 0.0 1.0 HB2 A:CYS29 4.3 0.0 1.0 N A:CYS29 4.4 0.0 1.0 H A:ALA28 4.4 0.0 1.0 CA A:CYS29 4.5 0.0 1.0 HD2 A:PRO27 4.5 0.0 1.0 N A:CYS15 4.6 0.0 1.0 CD1 A:ILE21 4.6 0.0 1.0 CA A:CYS15 4.6 0.0 1.0 CG1 A:ILE21 4.6 0.0 1.0 O A:CYS15 4.6 0.0 1.0 CA A:CYS26 4.6 0.0 1.0 HG13 A:ILE21 4.7 0.0 1.0 H A:LYS14 4.7 0.0 1.0 HG21 A:ILE35 4.7 0.0 1.0 CA A:CYS12 4.7 0.0 1.0 C A:CYS15 4.8 0.0 1.0 C A:CYS29 4.8 0.0 1.0 O A:GLY33 4.8 0.0 1.0 HD13 A:ILE21 4.8 0.0 1.0 HA2 A:GLY19 4.8 0.0 1.0 CG2 A:ILE35 4.8 0.0 1.0 HA A:CYS26 4.9 0.0 1.0 H A:GLY33 4.9 0.0 1.0 HA A:CYS12 5.0 0.0 1.0

Zinc binding site 2 out of 3 in the The Structure of Anti-Trap


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of The Structure of Anti-Trap within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn54 b:0.0 occ:1.00 SG B:CYS15 2.0 0.0 1.0 SG B:CYS29 2.0 0.0 1.0 SG B:CYS26 2.1 0.0 1.0 SG B:CYS12 2.3 0.0 1.0 HB3 B:CYS12 3.3 0.0 1.0 CB B:CYS12 3.3 0.0 1.0 CB B:CYS26 3.4 0.0 1.0 HB2 B:CYS12 3.4 0.0 1.0 HB3 B:CYS26 3.4 0.0 1.0 CB B:CYS29 3.6 0.0 1.0 HD12 B:ILE21 3.6 0.0 1.0 HB2 B:CYS26 3.7 0.0 1.0 HB3 B:CYS29 3.8 0.0 1.0 H B:CYS29 3.8 0.0 1.0 CB B:CYS15 3.8 0.0 1.0 H B:CYS15 3.8 0.0 1.0 HD2 B:PRO13 3.9 0.0 1.0 HG12 B:ILE21 4.0 0.0 1.0 HG22 B:ILE35 4.0 0.0 1.0 O B:CYS29 4.2 0.0 1.0 HB2 B:CYS15 4.2 0.0 1.0 HB3 B:CYS15 4.2 0.0 1.0 H B:ALA28 4.3 0.0 1.0 HB2 B:CYS29 4.3 0.0 1.0 N B:CYS29 4.3 0.0 1.0 HD2 B:PRO27 4.4 0.0 1.0 CA B:CYS29 4.4 0.0 1.0 CD1 B:ILE21 4.5 0.0 1.0 N B:CYS15 4.6 0.0 1.0 HG21 B:ILE35 4.6 0.0 1.0 CG1 B:ILE21 4.6 0.0 1.0 HG13 B:ILE21 4.7 0.0 1.0 CA B:CYS15 4.7 0.0 1.0 H B:LYS14 4.7 0.0 1.0 CA B:CYS26 4.7 0.0 1.0 CA B:CYS12 4.7 0.0 1.0 CG2 B:ILE35 4.7 0.0 1.0 C B:CYS29 4.8 0.0 1.0 HD13 B:ILE21 4.8 0.0 1.0 O B:CYS15 4.8 0.0 1.0 O B:GLY33 4.9 0.0 1.0 C B:CYS15 4.9 0.0 1.0 HA B:CYS12 4.9 0.0 1.0 CD B:PRO13 5.0 0.0 1.0 HG23 B:ILE35 5.0 0.0 1.0 HA B:CYS26 5.0 0.0 1.0

Zinc binding site 3 out of 3 in the The Structure of Anti-Trap


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of The Structure of Anti-Trap within 5.0Å range: probe atom residue distance (Å) B Occ C:Zn54 b:0.0 occ:1.00 SG C:CYS15 2.1 0.0 1.0 SG C:CYS26 2.1 0.0 1.0 SG C:CYS29 2.2 0.0 1.0 SG C:CYS12 2.3 0.0 1.0 HB3 C:CYS12 3.1 0.0 1.0 CB C:CYS12 3.3 0.0 1.0 HD12 C:ILE21 3.5 0.0 1.0 HB2 C:CYS12 3.5 0.0 1.0 HD2 C:PRO13 3.5 0.0 1.0 CB C:CYS26 3.5 0.0 1.0 HB3 C:CYS26 3.7 0.0 1.0 CB C:CYS29 3.7 0.0 1.0 H C:CYS15 3.7 0.0 1.0 HB3 C:CYS29 3.8 0.0 1.0 HB2 C:CYS26 3.8 0.0 1.0 H C:CYS29 3.8 0.0 1.0 CB C:CYS15 3.9 0.0 1.0 HG12 C:ILE21 4.0 0.0 1.0 HG22 C:ILE35 4.0 0.0 1.0 H C:ALA28 4.2 0.0 1.0 HD2 C:PRO27 4.3 0.0 1.0 HB3 C:CYS15 4.3 0.0 1.0 HB2 C:CYS15 4.3 0.0 1.0 CD1 C:ILE21 4.4 0.0 1.0 N C:CYS29 4.4 0.0 1.0 HB2 C:CYS29 4.4 0.0 1.0 H C:LYS14 4.5 0.0 1.0 HG13 C:ILE21 4.5 0.0 1.0 O C:CYS29 4.5 0.0 1.0 CG1 C:ILE21 4.5 0.0 1.0 HG21 C:ILE35 4.5 0.0 1.0 N C:CYS15 4.6 0.0 1.0 CA C:CYS29 4.6 0.0 1.0 CD C:PRO13 4.6 0.0 1.0 CA C:CYS12 4.7 0.0 1.0 HD13 C:ILE21 4.7 0.0 1.0 CG2 C:ILE35 4.7 0.0 1.0 CA C:CYS15 4.8 0.0 1.0 CA C:CYS26 4.8 0.0 1.0 HA C:CYS12 4.9 0.0 1.0

C.A.Mcelroy, P.Gollnick, M.P.Foster. Solution Structure of the B. Subtilis Anti-Trap Trimer and Its Interaction with Trap To Be Published.