Zinc in PDB 2ko0: Solution Structure of the Thap Zinc Finger of THAP1 in Complex with Its Dna Target

The binding sites of Zinc atom in the Solution Structure of the Thap Zinc Finger of THAP1 in Complex with Its Dna Target (pdb code 2ko0). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Solution Structure of the Thap Zinc Finger of THAP1 in Complex with Its Dna Target, PDB code: 2ko0:

Zinc binding site 1 out of 1 in the Solution Structure of the Thap Zinc Finger of THAP1 in Complex with Its Dna Target


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Thap Zinc Finger of THAP1 in Complex with Its Dna Target within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn88 b:10.0 occ:1.00 OE2 A:GLU56 1.6 10.0 1.0 SG A:CYS54 2.1 10.0 1.0 NE2 A:HIS57 2.1 10.0 1.0 SG A:CYS10 2.2 10.0 1.0 SG A:CYS5 2.5 10.0 1.0 CD A:GLU56 2.8 10.0 1.0 CE1 A:HIS57 3.0 10.0 1.0 CD2 A:HIS57 3.0 10.0 1.0 HE1 A:HIS57 3.2 10.0 1.0 HB2 A:ASN12 3.3 10.0 1.0 HD2 A:HIS57 3.3 10.0 1.0 HG3 A:GLU56 3.4 10.0 1.0 HB2 A:CYS5 3.5 10.0 1.0 CB A:CYS5 3.5 10.0 1.0 HB3 A:CYS10 3.5 10.0 1.0 CB A:CYS10 3.6 10.0 1.0 OE1 A:GLU56 3.6 10.0 1.0 HD21 A:ASN12 3.6 10.0 1.0 HB3 A:CYS5 3.6 10.0 1.0 CG A:GLU56 3.7 10.0 1.0 CB A:CYS54 3.9 10.0 1.0 ND1 A:HIS57 4.0 10.0 1.0 HB2 A:CYS10 4.0 10.0 1.0 CG A:HIS57 4.0 10.0 1.0 H A:CYS54 4.2 10.0 1.0 HG2 A:GLU56 4.2 10.0 1.0 HB3 A:CYS54 4.2 10.0 1.0 CB A:ASN12 4.3 10.0 1.0 ND2 A:ASN12 4.3 10.0 1.0 O A:CYS10 4.3 10.0 1.0 HB2 A:CYS54 4.4 10.0 1.0 H A:ASN12 4.4 10.0 1.0 HB3 A:ALA7 4.6 10.0 1.0 H A:CYS5 4.7 10.0 1.0 HB3 A:ASN12 4.7 10.0 1.0 CG A:ASN12 4.7 10.0 1.0 CA A:CYS54 4.8 10.0 1.0 CA A:CYS10 4.8 10.0 1.0 N A:CYS54 4.8 10.0 1.0 HD1 A:HIS57 4.8 10.0 1.0 HB2 A:GLU56 4.8 10.0 1.0 C A:CYS10 4.9 10.0 1.0 CB A:GLU56 4.9 10.0 1.0 O A:CYS54 4.9 10.0 1.0 CA A:CYS5 4.9 10.0 1.0 HD22 A:ASN12 5.0 10.0 1.0

S.Campagne, O.Saurel, V.Gervais, A.Milon. Structural Determinants of Specific Dna-Recognition By the Thap Zinc Finger Nucleic Acids Res. 2010.
ISSN: ESSN 1362-4962
PubMed: 20144952
DOI: 10.1093/NAR/GKQ053