Zinc in PDB 2kmn: Solution Structure of Peptide Deformylase Complexed with Actinonin

All present enzymatic activity of Solution Structure of Peptide Deformylase Complexed with Actinonin:
3.5.1.88;

The binding sites of Zinc atom in the Solution Structure of Peptide Deformylase Complexed with Actinonin (pdb code 2kmn). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Solution Structure of Peptide Deformylase Complexed with Actinonin, PDB code: 2kmn:

Zinc binding site 1 out of 1 in the Solution Structure of Peptide Deformylase Complexed with Actinonin


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of Peptide Deformylase Complexed with Actinonin within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn148 b:0.0 occ:1.00 HD2 A:HIS136 1.7 0.0 1.0 SG A:CYS90 2.0 0.0 1.0 CD2 A:HIS136 2.2 0.0 1.0 C3 A:BB2149 2.3 0.0 1.0 O2 A:BB2149 2.3 0.0 1.0 N1 A:BB2149 2.3 0.0 1.0 O4 A:BB2149 2.3 0.0 1.0 NE2 A:HIS132 2.4 0.0 1.0 NE2 A:HIS136 2.4 0.0 1.0 HE22 A:GLN50 2.6 0.0 1.0 HO2 A:BB2149 2.7 0.0 1.0 NE2 A:GLN50 2.9 0.0 1.0 HN1 A:BB2149 3.0 0.0 1.0 HE21 A:GLN50 3.1 0.0 1.0 HA A:CYS90 3.1 0.0 1.0 CB A:CYS90 3.2 0.0 1.0 HB3 A:CYS90 3.2 0.0 1.0 H52 A:BB2149 3.3 0.0 1.0 CE1 A:HIS132 3.3 0.0 1.0 CD2 A:HIS132 3.3 0.0 1.0 C5 A:BB2149 3.4 0.0 1.0 CG A:HIS136 3.5 0.0 1.0 HD2 A:HIS132 3.5 0.0 1.0 HE1 A:HIS132 3.5 0.0 1.0 CE1 A:HIS136 3.6 0.0 1.0 CA A:CYS90 3.7 0.0 1.0 H51 A:BB2149 3.7 0.0 1.0 CD A:GLN50 3.8 0.0 1.0 H A:LEU91 3.9 0.0 1.0 HD22 A:LEU91 4.0 0.0 1.0 HB2 A:CYS90 4.1 0.0 1.0 HB2 A:HIS136 4.1 0.0 1.0 ND1 A:HIS136 4.1 0.0 1.0 OE1 A:GLN50 4.2 0.0 1.0 HE2 A:PHE142 4.2 0.0 1.0 HD12 A:LEU141 4.2 0.0 1.0 H72 A:BB2149 4.2 0.0 1.0 OE1 A:GLU133 4.3 0.0 1.0 HD2 A:PHE142 4.4 0.0 1.0 HE1 A:HIS136 4.4 0.0 1.0 CB A:HIS136 4.4 0.0 1.0 HD11 A:LEU141 4.5 0.0 1.0 ND1 A:HIS132 4.5 0.0 1.0 O A:GLY89 4.5 0.0 1.0 CG A:HIS132 4.5 0.0 1.0 HG2 A:GLN50 4.6 0.0 1.0 N A:LEU91 4.6 0.0 1.0 HB2 A:ALA47 4.7 0.0 1.0 HD23 A:LEU91 4.7 0.0 1.0 C A:CYS90 4.7 0.0 1.0 N A:CYS90 4.7 0.0 1.0 CD2 A:LEU91 4.7 0.0 1.0 CG A:GLN50 4.7 0.0 1.0 C6 A:BB2149 4.7 0.0 1.0 CD1 A:LEU141 4.8 0.0 1.0 H A:SER92 4.9 0.0 1.0 HB3 A:HIS136 4.9 0.0 1.0 C A:GLY89 5.0 0.0 1.0 HD21 A:LEU91 5.0 0.0 1.0

C.A.Mcelroy, C.D.Amero, D.W.Byerly, M.P.Foster. Solution Structure of Peptide Deformylase Complexed with Actinonin To Be Published.