Zinc in PDB 2kft: uc(Nmr) Solution Structure of the First Phd Finger Domain of Human Autoimmune Regulator (Aire) in Complex with Histone H3(1-20CYS) Peptide

The binding sites of Zinc atom in the uc(Nmr) Solution Structure of the First Phd Finger Domain of Human Autoimmune Regulator (Aire) in Complex with Histone H3(1-20CYS) Peptide (pdb code 2kft). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the uc(Nmr) Solution Structure of the First Phd Finger Domain of Human Autoimmune Regulator (Aire) in Complex with Histone H3(1-20CYS) Peptide, PDB code: 2kft:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the uc(Nmr) Solution Structure of the First Phd Finger Domain of Human Autoimmune Regulator (Aire) in Complex with Histone H3(1-20CYS) Peptide


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of uc(Nmr) Solution Structure of the First Phd Finger Domain of Human Autoimmune Regulator (Aire) in Complex with Histone H3(1-20CYS) Peptide within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:0.0 occ:1.00 ND1 A:HIS319 2.1 0.0 1.0 HG21 A:VAL301 2.1 0.0 1.0 SG A:CYS302 2.3 0.0 1.0 SG A:CYS299 2.3 0.0 1.0 SG A:CYS322 2.3 0.0 1.0 HB2 A:HIS319 2.6 0.0 1.0 CG A:HIS319 3.1 0.0 1.0 CE1 A:HIS319 3.1 0.0 1.0 CG2 A:VAL301 3.1 0.0 1.0 HB2 A:CYS302 3.2 0.0 1.0 HE1 A:HIS319 3.3 0.0 1.0 CB A:HIS319 3.3 0.0 1.0 HG22 A:VAL301 3.3 0.0 1.0 CB A:CYS302 3.4 0.0 1.0 CB A:CYS299 3.4 0.0 1.0 CB A:CYS322 3.4 0.0 1.0 HB3 A:CYS299 3.5 0.0 1.0 HB2 A:CYS299 3.5 0.0 1.0 HB3 A:CYS322 3.5 0.0 1.0 HB2 A:CYS322 3.5 0.0 1.0 HG23 A:VAL301 3.5 0.0 1.0 H A:HIS319 3.7 0.0 1.0 H A:CYS302 3.7 0.0 1.0 N A:CYS302 3.9 0.0 1.0 HB3 A:HIS319 3.9 0.0 1.0 HG11 A:VAL301 4.1 0.0 1.0 NE2 A:HIS319 4.2 0.0 1.0 CD2 A:HIS319 4.2 0.0 1.0 HB3 A:CYS302 4.2 0.0 1.0 CA A:CYS302 4.2 0.0 1.0 H A:VAL301 4.2 0.0 1.0 CB A:VAL301 4.2 0.0 1.0 HG13 A:VAL301 4.4 0.0 1.0 N A:HIS319 4.4 0.0 1.0 C A:VAL301 4.4 0.0 1.0 CA A:HIS319 4.5 0.0 1.0 CG1 A:VAL301 4.5 0.0 1.0 HA A:CYS302 4.7 0.0 1.0 HD21 A:LEU308 4.7 0.0 1.0 CA A:VAL301 4.7 0.0 1.0 CA A:CYS299 4.8 0.0 1.0 CA A:CYS322 4.8 0.0 1.0 N A:VAL301 4.9 0.0 1.0 HA A:CYS322 5.0 0.0 1.0

Zinc binding site 2 out of 2 in the uc(Nmr) Solution Structure of the First Phd Finger Domain of Human Autoimmune Regulator (Aire) in Complex with Histone H3(1-20CYS) Peptide


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of uc(Nmr) Solution Structure of the First Phd Finger Domain of Human Autoimmune Regulator (Aire) in Complex with Histone H3(1-20CYS) Peptide within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn501 b:0.0 occ:1.00 SG A:CYS337 2.3 0.0 1.0 SG A:CYS340 2.3 0.0 1.0 SG A:CYS314 2.3 0.0 1.0 SG A:CYS311 2.3 0.0 1.0 H A:CYS337 2.8 0.0 1.0 HB2 A:CYS340 3.2 0.0 1.0 HB3 A:CYS337 3.3 0.0 1.0 HB3 A:CYS314 3.4 0.0 1.0 HB3 A:CYS311 3.4 0.0 1.0 CB A:CYS340 3.4 0.0 1.0 CB A:CYS337 3.4 0.0 1.0 CB A:CYS311 3.4 0.0 1.0 H A:CYS340 3.4 0.0 1.0 CB A:CYS314 3.4 0.0 1.0 HH21 A:ARG316 3.4 0.0 1.0 H A:CYS314 3.5 0.0 1.0 N A:CYS314 3.6 0.0 1.0 HB2 A:CYS311 3.6 0.0 1.0 N A:CYS337 3.7 0.0 1.0 NH2 A:ARG316 3.7 0.0 1.0 HA3 A:GLY313 3.8 0.0 1.0 H A:GLY313 4.0 0.0 1.0 C A:GLY313 4.0 0.0 1.0 HB2 A:ARG316 4.0 0.0 1.0 HH22 A:ARG316 4.1 0.0 1.0 CA A:CYS314 4.1 0.0 1.0 CA A:CYS337 4.1 0.0 1.0 HB3 A:CYS340 4.1 0.0 1.0 HB3 A:SER339 4.1 0.0 1.0 HE A:ARG316 4.2 0.0 1.0 N A:CYS340 4.2 0.0 1.0 CZ A:ARG316 4.2 0.0 1.0 CA A:GLY313 4.3 0.0 1.0 HB2 A:CYS337 4.3 0.0 1.0 HB2 A:CYS314 4.3 0.0 1.0 NE A:ARG316 4.4 0.0 1.0 CA A:CYS340 4.4 0.0 1.0 HA A:ARG336 4.4 0.0 1.0 N A:GLY313 4.5 0.0 1.0 HB3 A:ARG336 4.5 0.0 1.0 O A:CYS314 4.6 0.0 1.0 O A:GLY313 4.6 0.0 1.0 C A:CYS314 4.7 0.0 1.0 O A:CYS337 4.7 0.0 1.0 C A:CYS337 4.7 0.0 1.0 CA A:CYS311 4.8 0.0 1.0 HE1 A:PHE318 4.8 0.0 1.0 C A:ARG336 4.8 0.0 1.0 H A:ARG316 4.9 0.0 1.0 HA A:CYS340 5.0 0.0 1.0 HA A:CYS314 5.0 0.0 1.0

S.Chakravarty, L.Zeng, M.M.Zhou. Structure and Site-Specific Recognition of Histone H3 By the Phd Finger of Human Autoimmune Regulator. Structure V. 17 670 2009.
ISSN: ISSN 0969-2126
PubMed: 19446523
DOI: 10.1016/J.STR.2009.02.017