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Zinc in PDB 2kbx: Solution Structure of Ilk-Pinch Complex

Enzymatic activity of Solution Structure of Ilk-Pinch Complex

All present enzymatic activity of Solution Structure of Ilk-Pinch Complex:
2.7.11.1;

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of Ilk-Pinch Complex (pdb code 2kbx). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of Ilk-Pinch Complex, PDB code: 2kbx:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2kbx

Go back to Zinc Binding Sites List in 2kbx
Zinc binding site 1 out of 2 in the Solution Structure of Ilk-Pinch Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of Ilk-Pinch Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn298

b:0.5
occ:1.00
HB2 B:CYS10 1.9 0.5 1.0
ND1 B:HIS32 2.0 0.5 1.0
SG B:CYS10 2.3 0.6 1.0
SG B:CYS13 2.3 0.9 1.0
SG B:CYS35 2.3 0.6 1.0
CB B:CYS10 2.3 0.5 1.0
HB3 B:CYS13 2.6 1.3 1.0
HB3 B:CYS10 2.7 0.7 1.0
HB2 B:HIS32 2.7 0.4 1.0
H B:CYS13 2.9 0.6 1.0
CB B:CYS13 2.9 0.8 1.0
H B:HIS32 3.0 0.4 1.0
CE1 B:HIS32 3.0 0.5 1.0
CG B:HIS32 3.0 0.5 1.0
HE1 B:HIS32 3.2 0.5 1.0
CB B:HIS32 3.3 0.4 1.0
H B:GLY15 3.5 0.6 1.0
N B:CYS13 3.6 0.6 1.0
CA B:CYS10 3.7 0.5 1.0
CA B:CYS13 3.8 0.7 1.0
N B:HIS32 3.8 0.4 1.0
HB2 B:CYS13 3.8 1.3 1.0
CB B:CYS35 3.8 0.6 1.0
HB2 B:CYS35 3.9 0.7 1.0
HA B:CYS10 3.9 0.5 1.0
H B:LYS14 4.0 0.6 1.0
HB3 B:GLN34 4.0 1.1 1.0
H B:ARG12 4.0 0.5 1.0
CD2 B:HIS32 4.1 0.5 1.0
NE2 B:HIS32 4.1 0.5 1.0
CA B:HIS32 4.2 0.4 1.0
HB3 B:HIS32 4.2 0.5 1.0
HA3 B:GLY15 4.3 0.6 1.0
C B:CYS13 4.3 0.7 1.0
H B:CYS10 4.4 0.5 1.0
N B:GLY15 4.4 0.6 1.0
N B:LYS14 4.4 0.6 1.0
HA B:TYR31 4.4 0.4 1.0
HB3 B:CYS35 4.4 0.6 1.0
N B:CYS10 4.6 0.5 1.0
C B:CYS10 4.6 0.5 1.0
H B:CYS35 4.7 0.5 1.0
HE2 B:PHE17 4.7 0.4 1.0
HA B:CYS13 4.7 0.8 1.0
C B:ARG12 4.8 0.7 1.0
N B:CYS35 4.8 0.5 1.0
CA B:CYS35 4.8 0.5 1.0
HA B:HIS32 4.8 0.4 1.0
CA B:GLY15 4.9 0.7 1.0
C B:TYR31 4.9 0.4 1.0
HA B:CYS35 4.9 0.6 1.0
H B:GLU11 4.9 0.5 1.0
N B:ARG12 4.9 0.6 1.0

Zinc binding site 2 out of 2 in 2kbx

Go back to Zinc Binding Sites List in 2kbx
Zinc binding site 2 out of 2 in the Solution Structure of Ilk-Pinch Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of Ilk-Pinch Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn299

b:0.6
occ:1.00
H B:CYS59 1.9 0.8 1.0
OD2 B:ASP62 2.0 1.5 1.0
SG B:CYS59 2.3 0.6 1.0
SG B:CYS41 2.3 0.7 1.0
SG B:CYS38 2.3 0.6 1.0
CG B:ASP62 2.7 0.9 1.0
OD1 B:ASP62 2.7 1.4 1.0
N B:CYS59 2.9 0.6 1.0
HB3 B:CYS38 3.0 0.6 1.0
CB B:CYS59 3.2 0.6 1.0
CB B:CYS38 3.2 0.5 1.0
HB3 B:CYS59 3.3 0.7 1.0
HB2 B:CYS41 3.4 1.0 1.0
CB B:CYS41 3.5 0.8 1.0
CA B:CYS59 3.6 0.6 1.0
HA B:TYR58 3.6 0.5 1.0
HB2 B:CYS38 3.8 0.6 1.0
HB3 B:TYR58 3.8 0.6 1.0
H B:CYS41 3.9 0.6 1.0
C B:TYR58 3.9 0.5 1.0
H B:ASP62 3.9 0.6 1.0
HB2 B:GLN40 4.1 1.4 1.0
HD1 B:PHE45 4.1 2.2 1.0
CB B:ASP62 4.1 0.8 1.0
CA B:TYR58 4.2 0.5 1.0
HB2 B:CYS59 4.2 0.7 1.0
HB3 B:CYS41 4.2 1.0 1.0
O B:CYS59 4.4 0.6 1.0
HB2 B:ASP62 4.4 0.8 1.0
HA B:CYS59 4.4 0.6 1.0
C B:CYS59 4.4 0.6 1.0
N B:CYS41 4.5 0.6 1.0
CA B:CYS38 4.5 0.5 1.0
HA B:CYS38 4.5 0.5 1.0
HE21 B:GLN40 4.5 2.7 1.0
CB B:TYR58 4.5 0.5 1.0
HE1 B:PHE45 4.6 2.8 1.0
H B:GLN40 4.6 0.6 1.0
CA B:CYS41 4.6 0.7 1.0
HB3 B:ASP62 4.7 0.8 1.0
HE1 B:PHE50 4.7 1.7 1.0
HB3 B:HIS61 4.7 0.6 1.0
HD1 B:TYR58 4.7 0.6 1.0
N B:ASP62 4.7 0.6 1.0
CD1 B:PHE45 5.0 1.8 1.0

Reference:

J.Qin, J.Qin. N/A N/A.
Page generated: Wed Dec 16 03:34:12 2020

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