Zinc in PDB 2kbo: Structure, Interaction, and Real-Time Monitoring of the Enzymatic Reaction of Wild Type APOBEC3G

The binding sites of Zinc atom in the Structure, Interaction, and Real-Time Monitoring of the Enzymatic Reaction of Wild Type APOBEC3G (pdb code 2kbo). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure, Interaction, and Real-Time Monitoring of the Enzymatic Reaction of Wild Type APOBEC3G, PDB code: 2kbo:

Zinc binding site 1 out of 1 in the Structure, Interaction, and Real-Time Monitoring of the Enzymatic Reaction of Wild Type APOBEC3G


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure, Interaction, and Real-Time Monitoring of the Enzymatic Reaction of Wild Type APOBEC3G within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn250 b:0.0 occ:1.00 ND1 A:HIS67 2.0 0.0 1.0 SG A:CYS101 2.3 0.0 1.0 SG A:CYS98 2.3 0.0 1.0 HB2 A:HIS67 3.0 0.0 1.0 CE1 A:HIS67 3.0 0.0 1.0 CG A:HIS67 3.1 0.0 1.0 HB2 A:CYS101 3.1 0.0 1.0 HE1 A:HIS67 3.2 0.0 1.0 HB2 A:CYS98 3.2 0.0 1.0 CB A:CYS101 3.3 0.0 1.0 CB A:CYS98 3.4 0.0 1.0 CB A:HIS67 3.5 0.0 1.0 HZ3 A:TRP95 3.6 0.0 1.0 HB3 A:CYS98 3.7 0.0 1.0 HB3 A:CYS101 3.8 0.0 1.0 HH2 A:TRP95 3.9 0.0 1.0 H A:CYS101 4.0 0.0 1.0 HB3 A:HIS67 4.0 0.0 1.0 NE2 A:HIS67 4.1 0.0 1.0 CD2 A:HIS67 4.2 0.0 1.0 O A:GLY65 4.4 0.0 1.0 CZ3 A:TRP95 4.4 0.0 1.0 H A:HIS67 4.5 0.0 1.0 CH2 A:TRP95 4.5 0.0 1.0 CA A:CYS101 4.6 0.0 1.0 N A:CYS101 4.7 0.0 1.0 CA A:CYS98 4.7 0.0 1.0 HD22 A:LEU70 4.8 0.0 1.0 CA A:HIS67 4.8 0.0 1.0 HE1 A:PHE99 4.8 0.0 1.0 N A:CYS98 4.8 0.0 1.0 N A:HIS67 4.9 0.0 1.0 H A:CYS98 4.9 0.0 1.0

A.Furukawa, T.Nagata, A.Matsugami, Y.Habu, R.Sugiyama, F.Hayashi, N.Kobayashi, S.Yokoyama, H.Takaku, M.Katahira. Structure, Interaction and Real-Time Monitoring of the Enzymatic Reaction of Wild-Type APOBEC3G Embo J. V. 28 440 2009.
ISSN: ISSN 0261-4189
PubMed: 19153609
DOI: 10.1038/EMBOJ.2008.290