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Zinc in PDB 2ka4: uc(Nmr) Structure of the Cbp-TAZ1/STAT2-Tad Complex

Zinc Binding Sites:

The binding sites of Zinc atom in the uc(Nmr) Structure of the Cbp-TAZ1/STAT2-Tad Complex (pdb code 2ka4). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 3 binding sites of Zinc where determined in the uc(Nmr) Structure of the Cbp-TAZ1/STAT2-Tad Complex, PDB code: 2ka4:
Jump to Zinc binding site number: 1; 2; 3;

Zinc binding site 1 out of 3 in 2ka4

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Zinc binding site 1 out of 3 in the uc(Nmr) Structure of the Cbp-TAZ1/STAT2-Tad Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of uc(Nmr) Structure of the Cbp-TAZ1/STAT2-Tad Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn440

b:6.0
occ:1.00
NE2 A:HIS362 2.1 6.0 1.0
SG A:CYS366 2.3 6.0 1.0
SG A:CYS379 2.3 6.0 1.0
SG A:CYS384 2.3 6.0 1.0
CD2 A:HIS362 2.9 6.0 1.0
HD2 A:HIS362 3.0 6.0 1.0
HB2 A:CYS366 3.1 6.0 1.0
CB A:CYS366 3.1 6.0 1.0
HZ3 A:LYS388 3.1 6.0 1.0
HH12 A:ARG369 3.1 6.0 1.0
HZ1 A:LYS388 3.2 6.0 1.0
HH11 A:ARG369 3.2 6.0 1.0
CE1 A:HIS362 3.3 6.0 1.0
HB3 A:CYS366 3.3 6.0 1.0
HB2 A:LEU381 3.4 6.0 1.0
CB A:CYS379 3.5 6.0 1.0
NH1 A:ARG369 3.6 6.0 1.0
HB2 A:CYS379 3.6 6.0 1.0
HE1 A:HIS362 3.7 6.0 1.0
NZ A:LYS388 3.7 6.0 1.0
CB A:CYS384 3.8 6.0 1.0
HB2 A:CYS384 3.8 6.0 1.0
HB3 A:CYS379 3.8 6.0 1.0
H A:LEU381 4.1 6.0 1.0
CG A:HIS362 4.1 6.0 1.0
HE3 A:LYS388 4.2 6.0 1.0
HB3 A:CYS384 4.3 6.0 1.0
H A:SER380 4.3 6.0 1.0
ND1 A:HIS362 4.3 6.0 1.0
HZ2 A:LYS388 4.4 6.0 1.0
HA A:ALA363 4.4 6.0 1.0
CB A:LEU381 4.5 6.0 1.0
CA A:CYS366 4.5 6.0 1.0
CE A:LYS388 4.6 6.0 1.0
HD23 A:LEU381 4.6 6.0 1.0
HB3 A:LEU381 4.6 6.0 1.0
HA A:CYS366 4.7 6.0 1.0
HA A:CYS384 4.7 6.0 1.0
HD3 A:ARG369 4.8 6.0 1.0
HA A:CYS379 4.8 6.0 1.0
CA A:CYS379 4.8 6.0 1.0
HG A:LEU381 4.9 6.0 1.0
CZ A:ARG369 4.9 6.0 1.0
CA A:CYS384 4.9 6.0 1.0

Zinc binding site 2 out of 3 in 2ka4

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Zinc binding site 2 out of 3 in the uc(Nmr) Structure of the Cbp-TAZ1/STAT2-Tad Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of uc(Nmr) Structure of the Cbp-TAZ1/STAT2-Tad Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn441

b:6.0
occ:1.00
NE2 A:HIS393 2.1 6.0 1.0
SG A:CYS403 2.3 6.0 1.0
SG A:CYS397 2.3 6.0 1.0
SG A:CYS408 2.3 6.0 1.0
HH21 A:ARG412 2.8 6.0 1.0
CE1 A:HIS393 3.0 6.0 1.0
HB2 A:CYS397 3.1 6.0 1.0
CB A:CYS397 3.1 6.0 1.0
CD2 A:HIS393 3.1 6.0 1.0
CB A:CYS408 3.1 6.0 1.0
HB2 A:CYS408 3.2 6.0 1.0
HE1 A:HIS393 3.2 6.0 1.0
HB3 A:CYS408 3.2 6.0 1.0
HB2 A:CYS403 3.3 6.0 1.0
HB3 A:CYS397 3.3 6.0 1.0
HH22 A:ARG412 3.3 6.0 1.0
CB A:CYS403 3.3 6.0 1.0
HD2 A:HIS393 3.4 6.0 1.0
HB A:VAL405 3.4 6.0 1.0
NH2 A:ARG412 3.5 6.0 1.0
HB3 A:CYS403 3.7 6.0 1.0
ND1 A:HIS393 4.2 6.0 1.0
H A:VAL405 4.2 6.0 1.0
CG A:HIS393 4.2 6.0 1.0
HB1 A:ALA399 4.3 6.0 1.0
HA A:MET394 4.4 6.0 1.0
CB A:VAL405 4.5 6.0 1.0
HG22 A:VAL405 4.5 6.0 1.0
CA A:CYS397 4.5 6.0 1.0
CA A:CYS408 4.6 6.0 1.0
H A:GLY400 4.6 6.0 1.0
HG23 A:VAL405 4.6 6.0 1.0
CZ A:ARG412 4.7 6.0 1.0
CA A:CYS403 4.7 6.0 1.0
H A:ALA399 4.7 6.0 1.0
HE A:ARG412 4.7 6.0 1.0
H A:ALA409 4.7 6.0 1.0
HA A:CYS397 4.7 6.0 1.0
HA A:CYS403 4.8 6.0 1.0
CG2 A:VAL405 4.8 6.0 1.0
HG3 A:MET394 4.9 6.0 1.0

Zinc binding site 3 out of 3 in 2ka4

Go back to Zinc Binding Sites List in 2ka4
Zinc binding site 3 out of 3 in the uc(Nmr) Structure of the Cbp-TAZ1/STAT2-Tad Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of uc(Nmr) Structure of the Cbp-TAZ1/STAT2-Tad Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn442

b:6.0
occ:1.00
NE2 A:HIS417 2.1 6.0 1.0
SG A:CYS429 2.3 6.0 1.0
SG A:CYS426 2.3 6.0 1.0
SG A:CYS421 2.3 6.0 1.0
HZ1 A:LYS433 2.8 6.0 1.0
CB A:CYS421 2.9 6.0 1.0
HB3 A:CYS421 3.0 6.0 1.0
CD2 A:HIS417 3.0 6.0 1.0
HB2 A:CYS421 3.0 6.0 1.0
HD2 A:HIS417 3.1 6.0 1.0
HZ3 A:LYS433 3.1 6.0 1.0
CE1 A:HIS417 3.2 6.0 1.0
CB A:CYS426 3.4 6.0 1.0
HB2 A:CYS429 3.5 6.0 1.0
H A:CYS429 3.5 6.0 1.0
NZ A:LYS433 3.5 6.0 1.0
HB2 A:CYS426 3.5 6.0 1.0
HB3 A:CYS426 3.5 6.0 1.0
CB A:CYS429 3.5 6.0 1.0
HE1 A:HIS417 3.6 6.0 1.0
HZ2 A:LYS433 3.8 6.0 1.0
HG3 B:PRO792 3.9 6.0 1.0
CG A:HIS417 4.2 6.0 1.0
N A:CYS429 4.3 6.0 1.0
HB3 A:CYS429 4.3 6.0 1.0
ND1 A:HIS417 4.3 6.0 1.0
CA A:CYS421 4.4 6.0 1.0
HB A:VAL428 4.5 6.0 1.0
CA A:CYS429 4.5 6.0 1.0
HB3 A:ARG423 4.5 6.0 1.0
HB3 B:PRO792 4.7 6.0 1.0
HE3 A:LYS433 4.7 6.0 1.0
HA A:CYS421 4.8 6.0 1.0
CE A:LYS433 4.8 6.0 1.0
CA A:CYS426 4.8 6.0 1.0
CG B:PRO792 4.9 6.0 1.0
HA A:CYS429 4.9 6.0 1.0

Reference:

J.M.Wojciak, M.A.Martinez-Yamout, H.J.Dyson, P.E.Wright. Structural Basis For Recruitment of Cbp/P300 Coactivators By STAT1 and STAT2 Transactivation Domains Embo J. V. 28 948 2009.
ISSN: ISSN 0261-4189
PubMed: 19214187
DOI: 10.1038/EMBOJ.2009.30
Page generated: Thu Oct 17 01:32:23 2024

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