Zinc in PDB 2ka4: uc(Nmr) Structure of the Cbp-TAZ1/STAT2-Tad Complex
Zinc Binding Sites:
The binding sites of Zinc atom in the uc(Nmr) Structure of the Cbp-TAZ1/STAT2-Tad Complex
(pdb code 2ka4). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 3 binding sites of Zinc where determined in the
uc(Nmr) Structure of the Cbp-TAZ1/STAT2-Tad Complex, PDB code: 2ka4:
Jump to Zinc binding site number:
1;
2;
3;
Zinc binding site 1 out
of 3 in 2ka4
Go back to
Zinc Binding Sites List in 2ka4
Zinc binding site 1 out
of 3 in the uc(Nmr) Structure of the Cbp-TAZ1/STAT2-Tad Complex
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of uc(Nmr) Structure of the Cbp-TAZ1/STAT2-Tad Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn440
b:6.0
occ:1.00
|
NE2
|
A:HIS362
|
2.1
|
6.0
|
1.0
|
SG
|
A:CYS366
|
2.3
|
6.0
|
1.0
|
SG
|
A:CYS379
|
2.3
|
6.0
|
1.0
|
SG
|
A:CYS384
|
2.3
|
6.0
|
1.0
|
CD2
|
A:HIS362
|
2.9
|
6.0
|
1.0
|
HD2
|
A:HIS362
|
3.0
|
6.0
|
1.0
|
HB2
|
A:CYS366
|
3.1
|
6.0
|
1.0
|
CB
|
A:CYS366
|
3.1
|
6.0
|
1.0
|
HZ3
|
A:LYS388
|
3.1
|
6.0
|
1.0
|
HH12
|
A:ARG369
|
3.1
|
6.0
|
1.0
|
HZ1
|
A:LYS388
|
3.2
|
6.0
|
1.0
|
HH11
|
A:ARG369
|
3.2
|
6.0
|
1.0
|
CE1
|
A:HIS362
|
3.3
|
6.0
|
1.0
|
HB3
|
A:CYS366
|
3.3
|
6.0
|
1.0
|
HB2
|
A:LEU381
|
3.4
|
6.0
|
1.0
|
CB
|
A:CYS379
|
3.5
|
6.0
|
1.0
|
NH1
|
A:ARG369
|
3.6
|
6.0
|
1.0
|
HB2
|
A:CYS379
|
3.6
|
6.0
|
1.0
|
HE1
|
A:HIS362
|
3.7
|
6.0
|
1.0
|
NZ
|
A:LYS388
|
3.7
|
6.0
|
1.0
|
CB
|
A:CYS384
|
3.8
|
6.0
|
1.0
|
HB2
|
A:CYS384
|
3.8
|
6.0
|
1.0
|
HB3
|
A:CYS379
|
3.8
|
6.0
|
1.0
|
H
|
A:LEU381
|
4.1
|
6.0
|
1.0
|
CG
|
A:HIS362
|
4.1
|
6.0
|
1.0
|
HE3
|
A:LYS388
|
4.2
|
6.0
|
1.0
|
HB3
|
A:CYS384
|
4.3
|
6.0
|
1.0
|
H
|
A:SER380
|
4.3
|
6.0
|
1.0
|
ND1
|
A:HIS362
|
4.3
|
6.0
|
1.0
|
HZ2
|
A:LYS388
|
4.4
|
6.0
|
1.0
|
HA
|
A:ALA363
|
4.4
|
6.0
|
1.0
|
CB
|
A:LEU381
|
4.5
|
6.0
|
1.0
|
CA
|
A:CYS366
|
4.5
|
6.0
|
1.0
|
CE
|
A:LYS388
|
4.6
|
6.0
|
1.0
|
HD23
|
A:LEU381
|
4.6
|
6.0
|
1.0
|
HB3
|
A:LEU381
|
4.6
|
6.0
|
1.0
|
HA
|
A:CYS366
|
4.7
|
6.0
|
1.0
|
HA
|
A:CYS384
|
4.7
|
6.0
|
1.0
|
HD3
|
A:ARG369
|
4.8
|
6.0
|
1.0
|
HA
|
A:CYS379
|
4.8
|
6.0
|
1.0
|
CA
|
A:CYS379
|
4.8
|
6.0
|
1.0
|
HG
|
A:LEU381
|
4.9
|
6.0
|
1.0
|
CZ
|
A:ARG369
|
4.9
|
6.0
|
1.0
|
CA
|
A:CYS384
|
4.9
|
6.0
|
1.0
|
|
Zinc binding site 2 out
of 3 in 2ka4
Go back to
Zinc Binding Sites List in 2ka4
Zinc binding site 2 out
of 3 in the uc(Nmr) Structure of the Cbp-TAZ1/STAT2-Tad Complex
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of uc(Nmr) Structure of the Cbp-TAZ1/STAT2-Tad Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn441
b:6.0
occ:1.00
|
NE2
|
A:HIS393
|
2.1
|
6.0
|
1.0
|
SG
|
A:CYS403
|
2.3
|
6.0
|
1.0
|
SG
|
A:CYS397
|
2.3
|
6.0
|
1.0
|
SG
|
A:CYS408
|
2.3
|
6.0
|
1.0
|
HH21
|
A:ARG412
|
2.8
|
6.0
|
1.0
|
CE1
|
A:HIS393
|
3.0
|
6.0
|
1.0
|
HB2
|
A:CYS397
|
3.1
|
6.0
|
1.0
|
CB
|
A:CYS397
|
3.1
|
6.0
|
1.0
|
CD2
|
A:HIS393
|
3.1
|
6.0
|
1.0
|
CB
|
A:CYS408
|
3.1
|
6.0
|
1.0
|
HB2
|
A:CYS408
|
3.2
|
6.0
|
1.0
|
HE1
|
A:HIS393
|
3.2
|
6.0
|
1.0
|
HB3
|
A:CYS408
|
3.2
|
6.0
|
1.0
|
HB2
|
A:CYS403
|
3.3
|
6.0
|
1.0
|
HB3
|
A:CYS397
|
3.3
|
6.0
|
1.0
|
HH22
|
A:ARG412
|
3.3
|
6.0
|
1.0
|
CB
|
A:CYS403
|
3.3
|
6.0
|
1.0
|
HD2
|
A:HIS393
|
3.4
|
6.0
|
1.0
|
HB
|
A:VAL405
|
3.4
|
6.0
|
1.0
|
NH2
|
A:ARG412
|
3.5
|
6.0
|
1.0
|
HB3
|
A:CYS403
|
3.7
|
6.0
|
1.0
|
ND1
|
A:HIS393
|
4.2
|
6.0
|
1.0
|
H
|
A:VAL405
|
4.2
|
6.0
|
1.0
|
CG
|
A:HIS393
|
4.2
|
6.0
|
1.0
|
HB1
|
A:ALA399
|
4.3
|
6.0
|
1.0
|
HA
|
A:MET394
|
4.4
|
6.0
|
1.0
|
CB
|
A:VAL405
|
4.5
|
6.0
|
1.0
|
HG22
|
A:VAL405
|
4.5
|
6.0
|
1.0
|
CA
|
A:CYS397
|
4.5
|
6.0
|
1.0
|
CA
|
A:CYS408
|
4.6
|
6.0
|
1.0
|
H
|
A:GLY400
|
4.6
|
6.0
|
1.0
|
HG23
|
A:VAL405
|
4.6
|
6.0
|
1.0
|
CZ
|
A:ARG412
|
4.7
|
6.0
|
1.0
|
CA
|
A:CYS403
|
4.7
|
6.0
|
1.0
|
H
|
A:ALA399
|
4.7
|
6.0
|
1.0
|
HE
|
A:ARG412
|
4.7
|
6.0
|
1.0
|
H
|
A:ALA409
|
4.7
|
6.0
|
1.0
|
HA
|
A:CYS397
|
4.7
|
6.0
|
1.0
|
HA
|
A:CYS403
|
4.8
|
6.0
|
1.0
|
CG2
|
A:VAL405
|
4.8
|
6.0
|
1.0
|
HG3
|
A:MET394
|
4.9
|
6.0
|
1.0
|
|
Zinc binding site 3 out
of 3 in 2ka4
Go back to
Zinc Binding Sites List in 2ka4
Zinc binding site 3 out
of 3 in the uc(Nmr) Structure of the Cbp-TAZ1/STAT2-Tad Complex
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 3 of uc(Nmr) Structure of the Cbp-TAZ1/STAT2-Tad Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn442
b:6.0
occ:1.00
|
NE2
|
A:HIS417
|
2.1
|
6.0
|
1.0
|
SG
|
A:CYS429
|
2.3
|
6.0
|
1.0
|
SG
|
A:CYS426
|
2.3
|
6.0
|
1.0
|
SG
|
A:CYS421
|
2.3
|
6.0
|
1.0
|
HZ1
|
A:LYS433
|
2.8
|
6.0
|
1.0
|
CB
|
A:CYS421
|
2.9
|
6.0
|
1.0
|
HB3
|
A:CYS421
|
3.0
|
6.0
|
1.0
|
CD2
|
A:HIS417
|
3.0
|
6.0
|
1.0
|
HB2
|
A:CYS421
|
3.0
|
6.0
|
1.0
|
HD2
|
A:HIS417
|
3.1
|
6.0
|
1.0
|
HZ3
|
A:LYS433
|
3.1
|
6.0
|
1.0
|
CE1
|
A:HIS417
|
3.2
|
6.0
|
1.0
|
CB
|
A:CYS426
|
3.4
|
6.0
|
1.0
|
HB2
|
A:CYS429
|
3.5
|
6.0
|
1.0
|
H
|
A:CYS429
|
3.5
|
6.0
|
1.0
|
NZ
|
A:LYS433
|
3.5
|
6.0
|
1.0
|
HB2
|
A:CYS426
|
3.5
|
6.0
|
1.0
|
HB3
|
A:CYS426
|
3.5
|
6.0
|
1.0
|
CB
|
A:CYS429
|
3.5
|
6.0
|
1.0
|
HE1
|
A:HIS417
|
3.6
|
6.0
|
1.0
|
HZ2
|
A:LYS433
|
3.8
|
6.0
|
1.0
|
HG3
|
B:PRO792
|
3.9
|
6.0
|
1.0
|
CG
|
A:HIS417
|
4.2
|
6.0
|
1.0
|
N
|
A:CYS429
|
4.3
|
6.0
|
1.0
|
HB3
|
A:CYS429
|
4.3
|
6.0
|
1.0
|
ND1
|
A:HIS417
|
4.3
|
6.0
|
1.0
|
CA
|
A:CYS421
|
4.4
|
6.0
|
1.0
|
HB
|
A:VAL428
|
4.5
|
6.0
|
1.0
|
CA
|
A:CYS429
|
4.5
|
6.0
|
1.0
|
HB3
|
A:ARG423
|
4.5
|
6.0
|
1.0
|
HB3
|
B:PRO792
|
4.7
|
6.0
|
1.0
|
HE3
|
A:LYS433
|
4.7
|
6.0
|
1.0
|
HA
|
A:CYS421
|
4.8
|
6.0
|
1.0
|
CE
|
A:LYS433
|
4.8
|
6.0
|
1.0
|
CA
|
A:CYS426
|
4.8
|
6.0
|
1.0
|
CG
|
B:PRO792
|
4.9
|
6.0
|
1.0
|
HA
|
A:CYS429
|
4.9
|
6.0
|
1.0
|
|
Reference:
J.M.Wojciak,
M.A.Martinez-Yamout,
H.J.Dyson,
P.E.Wright.
Structural Basis For Recruitment of Cbp/P300 Coactivators By STAT1 and STAT2 Transactivation Domains Embo J. V. 28 948 2009.
ISSN: ISSN 0261-4189
PubMed: 19214187
DOI: 10.1038/EMBOJ.2009.30
Page generated: Thu Oct 17 01:32:23 2024
|