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Zinc in PDB 2k7r: N-Terminal Domain of the Bacillus Subtilis Helicase-Loading Protein Dnai

Zinc Binding Sites:

The binding sites of Zinc atom in the N-Terminal Domain of the Bacillus Subtilis Helicase-Loading Protein Dnai (pdb code 2k7r). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the N-Terminal Domain of the Bacillus Subtilis Helicase-Loading Protein Dnai, PDB code: 2k7r:

Zinc binding site 1 out of 1 in 2k7r

Go back to Zinc Binding Sites List in 2k7r
Zinc binding site 1 out of 1 in the N-Terminal Domain of the Bacillus Subtilis Helicase-Loading Protein Dnai


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of N-Terminal Domain of the Bacillus Subtilis Helicase-Loading Protein Dnai within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn129

b:0.0
occ:1.00
NE2 A:HIS84 2.0 0.0 1.0
SG A:CYS67 2.3 0.0 1.0
SG A:CYS101 2.3 0.0 1.0
SG A:CYS70 2.3 0.0 1.0
HB2 A:CYS101 3.0 0.0 1.0
CE1 A:HIS84 3.0 0.0 1.0
HB3 A:CYS70 3.0 0.0 1.0
CD2 A:HIS84 3.0 0.0 1.0
HD2 A:HIS84 3.2 0.0 1.0
HE1 A:HIS84 3.2 0.0 1.0
CB A:CYS101 3.3 0.0 1.0
CB A:CYS70 3.3 0.0 1.0
HB3 A:CYS67 3.3 0.0 1.0
CB A:CYS67 3.3 0.0 1.0
H A:CYS67 3.4 0.0 1.0
H A:CYS70 3.7 0.0 1.0
N A:CYS67 3.7 0.0 1.0
OD1 A:ASN66 3.7 0.0 1.0
O A:CYS67 3.7 0.0 1.0
HB3 A:TYR69 3.7 0.0 1.0
CA A:CYS67 3.9 0.0 1.0
N A:CYS70 3.9 0.0 1.0
HB3 A:CYS101 4.0 0.0 1.0
C A:CYS67 4.1 0.0 1.0
HB2 A:CYS70 4.1 0.0 1.0
HA A:CYS101 4.1 0.0 1.0
ND1 A:HIS84 4.1 0.0 1.0
CG A:HIS84 4.2 0.0 1.0
CA A:CYS70 4.2 0.0 1.0
HB2 A:CYS67 4.3 0.0 1.0
CA A:CYS101 4.3 0.0 1.0
HD2 A:PRO102 4.3 0.0 1.0
HG21 A:VAL103 4.4 0.0 1.0
H A:TYR69 4.5 0.0 1.0
H A:SER71 4.5 0.0 1.0
HB A:VAL103 4.5 0.0 1.0
C A:TYR69 4.5 0.0 1.0
C A:ASN66 4.5 0.0 1.0
HG23 A:VAL103 4.6 0.0 1.0
HA A:ASN66 4.6 0.0 1.0
CB A:TYR69 4.7 0.0 1.0
CG A:ASN66 4.8 0.0 1.0
N A:TYR69 4.8 0.0 1.0
O A:TYR83 4.9 0.0 1.0
HA A:CYS67 4.9 0.0 1.0
HA A:CYS70 4.9 0.0 1.0
HB2 A:TYR69 4.9 0.0 1.0
CA A:TYR69 4.9 0.0 1.0
CG2 A:VAL103 4.9 0.0 1.0
H A:VAL103 5.0 0.0 1.0

Reference:

K.V.Loscha, K.Jaudzems, C.Ioannou, X.C.Su, F.R.Hill, G.Otting, N.E.Dixon, E.Liepinsh. A Novel Zinc-Binding Fold in the Helicase Interaction Domain of the Bacillus Subtilis Dnai Helicase Loader Nucleic Acids Res. V. 37 2395 2009.
ISSN: ISSN 0305-1048
PubMed: 19255093
DOI: 10.1093/NAR/GKP092
Page generated: Wed Dec 16 03:33:46 2020

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