Zinc in PDB 2k78: Solution Structure of the Isdc Neat Domain Bound to Zinc Protoporphyrin

The binding sites of Zinc atom in the Solution Structure of the Isdc Neat Domain Bound to Zinc Protoporphyrin (pdb code 2k78). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Solution Structure of the Isdc Neat Domain Bound to Zinc Protoporphyrin, PDB code: 2k78:

Zinc binding site 1 out of 1 in the Solution Structure of the Isdc Neat Domain Bound to Zinc Protoporphyrin


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Isdc Neat Domain Bound to Zinc Protoporphyrin within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn151 b:0.0 occ:1.00 ZN A:ZNH151 0.0 0.0 1.0 NA A:ZNH151 1.9 0.0 1.0 ND A:ZNH151 1.9 0.0 1.0 NC A:ZNH151 1.9 0.0 1.0 NB A:ZNH151 1.9 0.0 1.0 OH A:TYR132 2.6 0.0 1.0 HH A:TYR132 2.6 0.0 1.0 HG21 A:ILE48 2.9 0.0 1.0 C4B A:ZNH151 2.9 0.0 1.0 C1C A:ZNH151 2.9 0.0 1.0 C1D A:ZNH151 3.0 0.0 1.0 C4D A:ZNH151 3.0 0.0 1.0 C4A A:ZNH151 3.0 0.0 1.0 C1A A:ZNH151 3.0 0.0 1.0 C1B A:ZNH151 3.0 0.0 1.0 C4C A:ZNH151 3.1 0.0 1.0 CHC A:ZNH151 3.1 0.0 1.0 CHA A:ZNH151 3.4 0.0 1.0 CHD A:ZNH151 3.4 0.0 1.0 CHB A:ZNH151 3.4 0.0 1.0 CZ A:TYR132 3.4 0.0 1.0 HD12 A:ILE48 3.5 0.0 1.0 HE2 A:TYR132 3.6 0.0 1.0 CG2 A:ILE48 3.8 0.0 1.0 CE2 A:TYR132 3.8 0.0 1.0 HG22 A:ILE48 3.9 0.0 1.0 HG23 A:ILE48 4.1 0.0 1.0 C2C A:ZNH151 4.1 0.0 1.0 C3A A:ZNH151 4.1 0.0 1.0 C2A A:ZNH151 4.1 0.0 1.0 C3C A:ZNH151 4.2 0.0 1.0 C3B A:ZNH151 4.2 0.0 1.0 C2B A:ZNH151 4.2 0.0 1.0 C2D A:ZNH151 4.2 0.0 1.0 C3D A:ZNH151 4.2 0.0 1.0 HHC A:ZNH151 4.2 0.0 1.0 CE1 A:TYR132 4.4 0.0 1.0 HHA A:ZNH151 4.5 0.0 1.0 HHD A:ZNH151 4.5 0.0 1.0 HHB A:ZNH151 4.5 0.0 1.0 HE1 A:TYR132 4.5 0.0 1.0 CD1 A:ILE48 4.6 0.0 1.0 HG12 A:VAL119 4.8 0.0 1.0 HD13 A:ILE48 4.9 0.0 1.0 HG12 A:ILE48 5.0 0.0 1.0

V.A.Villareal, R.M.Pilpa, S.A.Robson, E.A.Fadeev, R.T.Clubb. The Isdc Protein From Staphylococcus Aureus Uses A Flexible Binding Pocket to Capture Heme. J.Biol.Chem. V. 283 31591 2008.
ISSN: ISSN 0021-9258
PubMed: 18715872
DOI: 10.1074/JBC.M801126200