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Zinc in PDB 2k2d: Solution uc(Nmr) Structure of C-Terminal Domain of Human PIRH2. Northeast Structural Genomics Consortium (Nesg) Target HT2C

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution uc(Nmr) Structure of C-Terminal Domain of Human PIRH2. Northeast Structural Genomics Consortium (Nesg) Target HT2C (pdb code 2k2d). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Solution uc(Nmr) Structure of C-Terminal Domain of Human PIRH2. Northeast Structural Genomics Consortium (Nesg) Target HT2C, PDB code: 2k2d:

Zinc binding site 1 out of 1 in 2k2d

Go back to Zinc Binding Sites List in 2k2d
Zinc binding site 1 out of 1 in the Solution uc(Nmr) Structure of C-Terminal Domain of Human PIRH2. Northeast Structural Genomics Consortium (Nesg) Target HT2C


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution uc(Nmr) Structure of C-Terminal Domain of Human PIRH2. Northeast Structural Genomics Consortium (Nesg) Target HT2C within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn80

b:0.0
occ:1.00
SG A:CYS40 2.3 0.0 1.0
SG A:CYS61 2.3 0.0 1.0
SG A:CYS43 2.3 0.0 1.0
SG A:CYS58 2.3 0.0 1.0
HB A:ILE60 3.1 0.0 1.0
HB2 A:CYS40 3.3 0.0 1.0
CB A:CYS40 3.4 0.0 1.0
HB3 A:CYS61 3.4 0.0 1.0
HB3 A:CYS43 3.4 0.0 1.0
HB3 A:CYS58 3.5 0.0 1.0
H A:CYS43 3.5 0.0 1.0
CB A:CYS58 3.5 0.0 1.0
CB A:CYS43 3.5 0.0 1.0
CB A:CYS61 3.5 0.0 1.0
HB3 A:CYS40 3.6 0.0 1.0
HD12 A:ILE60 3.7 0.0 1.0
H A:CYS61 3.7 0.0 1.0
HB2 A:CYS58 3.7 0.0 1.0
HB3 A:SER63 3.9 0.0 1.0
OD1 A:ASP42 4.0 0.0 1.0
N A:CYS61 4.0 0.0 1.0
OD2 A:ASP42 4.1 0.0 1.0
N A:CYS43 4.2 0.0 1.0
CB A:ILE60 4.2 0.0 1.0
CA A:CYS61 4.3 0.0 1.0
H A:SER63 4.3 0.0 1.0
CG A:ASP42 4.4 0.0 1.0
HB2 A:CYS43 4.4 0.0 1.0
HB2 A:CYS61 4.4 0.0 1.0
CA A:CYS43 4.4 0.0 1.0
H A:ILE60 4.4 0.0 1.0
H A:GLY45 4.4 0.0 1.0
CD1 A:ILE60 4.6 0.0 1.0
C A:ILE60 4.7 0.0 1.0
CA A:CYS40 4.8 0.0 1.0
HD11 A:ILE60 4.8 0.0 1.0
H A:ASP42 4.8 0.0 1.0
CG1 A:ILE60 4.8 0.0 1.0
HA A:CYS40 4.9 0.0 1.0
CA A:CYS58 4.9 0.0 1.0
CA A:ILE60 4.9 0.0 1.0
H A:ASN44 4.9 0.0 1.0
CB A:SER63 4.9 0.0 1.0
HG13 A:ILE60 4.9 0.0 1.0
HG23 A:THR66 5.0 0.0 1.0
C A:CYS43 5.0 0.0 1.0

Reference:

Y.Sheng, R.C.Laister, A.Lemak, B.Wu, E.Tai, S.Duan, J.Lukin, M.Sunnerhagen, S.Srisailam, M.Karra, S.Benchimol, C.H.Arrowsmith. Molecular Basis of PIRH2-Mediated P53 Ubiquitylation. Nat.Struct.Mol.Biol. V. 15 1334 2008.
ISSN: ISSN 1545-9993
PubMed: 19043414
DOI: 10.1038/NSMB.1521
Page generated: Wed Dec 16 03:33:21 2020

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