Zinc in PDB 2jyw: Solution Structure of C-Terminal Domain of APOBEC3G

The binding sites of Zinc atom in the Solution Structure of C-Terminal Domain of APOBEC3G (pdb code 2jyw). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Solution Structure of C-Terminal Domain of APOBEC3G, PDB code: 2jyw:

Zinc binding site 1 out of 1 in the Solution Structure of C-Terminal Domain of APOBEC3G


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of C-Terminal Domain of APOBEC3G within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn188 b:0.0 occ:1.00 ND1 A:HIS60 2.0 0.0 1.0 SG A:CYS94 2.3 0.0 1.0 SG A:CYS91 2.3 0.0 1.0 HB2 A:HIS60 2.8 0.0 1.0 CG A:HIS60 3.0 0.0 1.0 CE1 A:HIS60 3.0 0.0 1.0 HA3 A:GLY17 3.0 0.0 1.0 OE2 A:GLU62 3.1 0.0 1.0 HA2 A:GLY17 3.2 0.0 1.0 HE1 A:HIS60 3.3 100.0 1.0 HB2 A:CYS94 3.3 0.0 1.0 HB2 A:CYS91 3.3 0.0 1.0 CB A:HIS60 3.3 0.0 1.0 CB A:CYS94 3.3 0.0 1.0 CB A:CYS91 3.4 0.0 1.0 H A:ARG18 3.5 0.0 1.0 CA A:GLY17 3.5 0.0 1.0 HB3 A:HIS60 3.6 0.0 1.0 HB3 A:CYS94 3.6 0.0 1.0 HB3 A:CYS91 3.8 0.0 1.0 N A:ARG18 3.8 0.0 1.0 C A:GLY17 3.9 0.0 1.0 NE2 A:HIS60 4.1 0.0 1.0 CD2 A:HIS60 4.1 0.0 1.0 CD A:GLU62 4.3 0.0 1.0 HB3 A:ARG18 4.3 0.0 1.0 H A:CYS94 4.5 0.0 1.0 HH2 A:TRP88 4.5 100.0 1.0 O A:GLY17 4.7 0.0 1.0 HZ2 A:TRP88 4.7 100.0 1.0 HA A:ARG18 4.7 100.0 1.0 CH2 A:TRP88 4.7 0.0 1.0 CA A:CYS94 4.7 0.0 1.0 CA A:CYS91 4.8 0.0 1.0 CA A:HIS60 4.8 0.0 1.0 CA A:ARG18 4.8 0.0 1.0 O A:HIS60 4.8 0.0 1.0 CZ2 A:TRP88 4.8 0.0 1.0 HA A:CYS91 4.8 100.0 1.0 N A:GLY17 4.9 0.0 1.0 H A:HIS60 4.9 0.0 1.0 HG3 A:GLU62 4.9 0.0 1.0 HG2 A:GLU62 5.0 0.0 1.0 HE2 A:HIS60 5.0 100.0 1.0

K.M.Chen, E.Harjes, P.J.Gross, A.Fahmy, Y.Lu, K.Shindo, R.S.Harris, H.Matsuo. Structure of the Dna Deaminase Domain of the Hiv-1 Restriction Factor APOBEC3G. Nature V. 452 116 2008.
ISSN: ISSN 0028-0836
PubMed: 18288108
DOI: 10.1038/NATURE06638