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Zinc in PDB 2i5o: Solution Structure of the Ubiquitin-Binding Zinc Finger (Ubz) Domain of the Human Dna Y-Polymerase Eta

Enzymatic activity of Solution Structure of the Ubiquitin-Binding Zinc Finger (Ubz) Domain of the Human Dna Y-Polymerase Eta

All present enzymatic activity of Solution Structure of the Ubiquitin-Binding Zinc Finger (Ubz) Domain of the Human Dna Y-Polymerase Eta:
2.7.7.7;

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the Ubiquitin-Binding Zinc Finger (Ubz) Domain of the Human Dna Y-Polymerase Eta (pdb code 2i5o). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Solution Structure of the Ubiquitin-Binding Zinc Finger (Ubz) Domain of the Human Dna Y-Polymerase Eta, PDB code: 2i5o:

Zinc binding site 1 out of 1 in 2i5o

Go back to Zinc Binding Sites List in 2i5o
Zinc binding site 1 out of 1 in the Solution Structure of the Ubiquitin-Binding Zinc Finger (Ubz) Domain of the Human Dna Y-Polymerase Eta


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Ubiquitin-Binding Zinc Finger (Ubz) Domain of the Human Dna Y-Polymerase Eta within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn336

b:0.0
occ:1.00
NE2 A:HIS27 2.0 0.0 1.0
NE2 A:HIS31 2.1 0.0 1.0
SG A:CYS12 2.2 0.0 1.0
SG A:CYS15 2.3 0.0 1.0
CD2 A:HIS27 2.9 0.0 1.0
CD2 A:HIS31 3.0 0.0 1.0
HB3 A:CYS12 3.1 0.0 1.0
HD2 A:HIS27 3.1 0.0 1.0
CE1 A:HIS27 3.1 0.0 1.0
CE1 A:HIS31 3.1 0.0 1.0
HD2 A:HIS31 3.2 0.0 1.0
CB A:CYS12 3.2 0.0 1.0
HB3 A:CYS15 3.2 0.0 1.0
HE1 A:HIS27 3.4 0.0 1.0
CB A:CYS15 3.4 0.0 1.0
HE1 A:HIS31 3.4 0.0 1.0
HB2 A:CYS12 3.5 0.0 1.0
HG23 A:VAL19 3.8 0.0 1.0
H A:CYS15 3.9 0.0 1.0
HB2 A:LYS14 3.9 0.0 1.0
N A:CYS15 4.0 0.0 1.0
CG A:HIS27 4.1 0.0 1.0
CG A:HIS31 4.2 0.0 1.0
ND1 A:HIS27 4.2 0.0 1.0
HB2 A:SER17 4.2 0.0 1.0
HB2 A:CYS15 4.2 0.0 1.0
ND1 A:HIS31 4.2 0.0 1.0
CA A:CYS15 4.3 0.0 1.0
HB3 A:LYS14 4.4 0.0 1.0
H A:LYS14 4.6 0.0 1.0
CA A:CYS12 4.6 0.0 1.0
C A:LYS14 4.6 0.0 1.0
CB A:LYS14 4.6 0.0 1.0
O A:CYS12 4.7 0.0 1.0
CG2 A:VAL19 4.7 0.0 1.0
H A:SER17 4.7 0.0 1.0
HG21 A:VAL19 4.7 0.0 1.0
C A:CYS12 4.9 0.0 1.0
H A:GLY16 4.9 0.0 1.0
CA A:LYS14 4.9 0.0 1.0

Reference:

M.G.Bomar, M.T.Pai, S.R.Tzeng, S.S.Li, P.Zhou. Structure of the Ubiquitin-Binding Zinc Finger Domain of Human Dna Y-Polymerase Eta. Embo Rep. V. 8 247 2007.
ISSN: ISSN 1469-221X
PubMed: 17304240
DOI: 10.1038/SJ.EMBOR.7400901
Page generated: Thu Oct 17 00:51:37 2024

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