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Zinc in PDB 2hvy: Crystal Structure of An H/Aca Box Rnp From Pyrococcus Furiosus

Protein crystallography data

The structure of Crystal Structure of An H/Aca Box Rnp From Pyrococcus Furiosus, PDB code: 2hvy was solved by K.Ye, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.30
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 83.031, 90.950, 114.064, 90.00, 90.00, 90.00
R / Rfree (%) 23.8 / 27.8

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of An H/Aca Box Rnp From Pyrococcus Furiosus (pdb code 2hvy). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of An H/Aca Box Rnp From Pyrococcus Furiosus, PDB code: 2hvy:

Zinc binding site 1 out of 1 in 2hvy

Go back to Zinc Binding Sites List in 2hvy
Zinc binding site 1 out of 1 in the Crystal Structure of An H/Aca Box Rnp From Pyrococcus Furiosus


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of An H/Aca Box Rnp From Pyrococcus Furiosus within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Zn201

b:64.8
occ:1.00
SG C:CYS20 2.1 42.2 1.0
SG C:CYS23 2.4 41.8 1.0
SG C:CYS11 2.4 43.1 1.0
SG C:CYS8 2.5 43.7 1.0
CB C:CYS20 3.1 42.1 1.0
CB C:CYS8 3.2 43.2 1.0
CB C:CYS11 3.5 42.8 1.0
CB C:CYS23 3.7 41.7 1.0
N C:CYS23 3.8 41.7 1.0
CA C:CYS23 4.3 41.7 1.0
N C:CYS11 4.3 42.9 1.0
CA C:CYS11 4.4 42.8 1.0
CB C:VAL22 4.4 41.8 1.0
CA C:CYS20 4.5 42.1 1.0
CB C:ARG13 4.6 41.9 1.0
CG C:GLU25 4.6 42.1 1.0
CA C:CYS8 4.7 43.3 1.0
N C:GLY24 4.8 41.8 1.0
C C:VAL22 4.8 41.7 1.0
N C:VAL22 4.9 41.8 1.0
CA C:VAL22 4.9 41.8 1.0
C C:CYS23 5.0 41.8 1.0

Reference:

L.Li, K.Ye. Crystal Structure of An H/Aca Box Ribonucleoprotein Particle Nature V. 443 302 2006.
ISSN: ISSN 0028-0836
PubMed: 16943774
DOI: 10.1038/NATURE05151
Page generated: Thu Oct 17 00:43:57 2024

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