Zinc in PDB 2hu9: X-Ray Structure of the Archaeoglobus Fulgidus Copz N- Terminal Domain

The structure of X-Ray Structure of the Archaeoglobus Fulgidus Copz N- Terminal Domain, PDB code: 2hu9 was solved by M.H.Sazinsky, B.Lemoine, J.M.Arguello, A.C.Rosenzweig, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	51.16 / 1.78
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	56.253, 64.469, 84.148, 90.00, 90.00, 90.00
R / Rfree (%)	20.5 / 22.1

The structure of X-Ray Structure of the Archaeoglobus Fulgidus Copz N- Terminal Domain also contains other interesting chemical elements:

Iron

(Fe)

4 atoms

The binding sites of Zinc atom in the X-Ray Structure of the Archaeoglobus Fulgidus Copz N- Terminal Domain (pdb code 2hu9). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the X-Ray Structure of the Archaeoglobus Fulgidus Copz N- Terminal Domain, PDB code: 2hu9:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the X-Ray Structure of the Archaeoglobus Fulgidus Copz N- Terminal Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of X-Ray Structure of the Archaeoglobus Fulgidus Copz N- Terminal Domain within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn132 b:31.7 occ:1.00 SG A:CYS38 2.2 31.9 1.0 SG A:CYS4 2.3 31.6 1.0 SG A:CYS7 2.4 32.8 1.0 SG A:CYS43 2.4 32.1 1.0 CB A:CYS43 3.1 31.1 1.0 CB A:CYS4 3.1 31.7 1.0 CB A:CYS38 3.4 30.8 1.0 CB A:CYS7 3.5 36.4 1.0 N A:CYS7 3.8 36.9 1.0 CB A:VAL45 4.1 28.8 1.0 CA A:CYS7 4.2 36.3 1.0 CA A:CYS4 4.6 31.4 1.0 CA A:CYS43 4.6 31.7 1.0 CG2 A:VAL45 4.7 28.3 1.0 CB A:GLU6 4.7 37.9 1.0 O A:VAL45 4.7 26.2 1.0 CG1 A:VAL45 4.7 27.3 1.0 CA A:CYS38 4.8 30.2 1.0 CB A:LEU40 4.8 32.1 1.0 O A:HOH331 4.9 41.4 1.0 C A:GLU6 4.9 37.8 1.0 N A:VAL45 5.0 29.7 1.0 CB A:THR9 5.0 34.1 1.0 C A:CYS7 5.0 36.8 1.0 NZ A:LYS66 5.0 29.3 1.0 CA A:VAL45 5.0 27.8 1.0

Zinc binding site 2 out of 2 in the X-Ray Structure of the Archaeoglobus Fulgidus Copz N- Terminal Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of X-Ray Structure of the Archaeoglobus Fulgidus Copz N- Terminal Domain within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn132 b:32.1 occ:1.00 SG B:CYS43 2.2 32.2 1.0 SG B:CYS7 2.4 35.6 1.0 SG B:CYS4 2.4 32.8 1.0 SG B:CYS38 2.4 29.2 1.0 CB B:CYS43 3.1 32.7 1.0 CB B:CYS4 3.1 35.3 1.0 CB B:CYS7 3.4 39.7 1.0 CB B:CYS38 3.5 28.3 1.0 N B:CYS7 3.9 40.5 1.0 CB B:VAL45 4.1 28.1 1.0 CA B:CYS7 4.2 39.6 1.0 CB B:GLU6 4.5 42.4 1.0 CA B:CYS43 4.5 32.2 1.0 CG1 B:VAL45 4.6 25.5 1.0 CA B:CYS4 4.6 36.7 1.0 O B:VAL45 4.6 25.0 1.0 CB B:LEU40 4.8 29.7 1.0 C B:GLU6 4.8 41.5 1.0 CG2 B:VAL45 4.8 28.8 1.0 CA B:CYS38 4.8 27.2 1.0 CB B:THR9 4.9 38.1 1.0 NZ B:LYS66 4.9 26.2 1.0 C B:CYS7 4.9 40.1 1.0 N B:VAL45 4.9 28.6 1.0 CA B:VAL45 5.0 26.9 1.0 N B:SER8 5.0 39.9 1.0 CA B:GLU6 5.0 41.7 1.0

M.H.Sazinsky, B.Lemoine, M.Orofino, R.Davydov, K.Z.Bencze, T.L.Stemmler, B.M.Hoffman, J.M.Arguello, A.C.Rosenzweig. Characterization and Structure of A ZN2+ and [2FE-2S]-Containing Copper Chaperone From Archaeoglobus Fulgidus. J.Biol.Chem. V. 282 25950 2007.
ISSN: ISSN 0021-9258
PubMed: 17609202
DOI: 10.1074/JBC.M703311200