Zinc in PDB 2fc7: Solution Structure of the Zz Domain of ZZZ3 Protein
Zinc Binding Sites:
The binding sites of Zinc atom in the Solution Structure of the Zz Domain of ZZZ3 Protein
(pdb code 2fc7). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Solution Structure of the Zz Domain of ZZZ3 Protein, PDB code: 2fc7:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 2fc7
Go back to
Zinc Binding Sites List in 2fc7
Zinc binding site 1 out
of 2 in the Solution Structure of the Zz Domain of ZZZ3 Protein
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Solution Structure of the Zz Domain of ZZZ3 Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn201
b:0.0
occ:1.00
|
SG
|
A:CYS51
|
2.2
|
0.0
|
1.0
|
SG
|
A:CYS24
|
2.2
|
0.0
|
1.0
|
SG
|
A:CYS27
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS54
|
2.3
|
0.0
|
1.0
|
H
|
A:CYS27
|
2.8
|
0.0
|
1.0
|
HB2
|
A:CYS54
|
2.9
|
0.0
|
1.0
|
HG21
|
A:ILE29
|
3.0
|
0.0
|
1.0
|
HB3
|
A:ASN26
|
3.1
|
0.0
|
1.0
|
HB3
|
A:CYS27
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS54
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS24
|
3.2
|
0.0
|
1.0
|
HB3
|
A:CYS24
|
3.3
|
0.0
|
1.0
|
H
|
A:CYS51
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS27
|
3.3
|
0.0
|
1.0
|
HB2
|
A:CYS24
|
3.3
|
0.0
|
1.0
|
HG23
|
A:ILE29
|
3.4
|
0.0
|
1.0
|
H
|
A:CYS54
|
3.6
|
0.0
|
1.0
|
N
|
A:CYS27
|
3.6
|
0.0
|
1.0
|
CB
|
A:CYS51
|
3.6
|
0.0
|
1.0
|
HB3
|
A:CYS51
|
3.6
|
0.0
|
1.0
|
CG2
|
A:ILE29
|
3.7
|
0.0
|
1.0
|
H
|
A:GLY28
|
3.8
|
0.0
|
1.0
|
HB3
|
A:SER53
|
3.8
|
0.0
|
1.0
|
HB3
|
A:CYS54
|
3.9
|
0.0
|
1.0
|
HD21
|
A:ASN26
|
4.0
|
0.0
|
1.0
|
H
|
A:ILE29
|
4.0
|
0.0
|
1.0
|
CA
|
A:CYS27
|
4.0
|
0.0
|
1.0
|
N
|
A:CYS54
|
4.1
|
0.0
|
1.0
|
N
|
A:CYS51
|
4.1
|
0.0
|
1.0
|
CB
|
A:ASN26
|
4.2
|
0.0
|
1.0
|
HB2
|
A:CYS27
|
4.2
|
0.0
|
1.0
|
H
|
A:ASN26
|
4.3
|
0.0
|
1.0
|
CA
|
A:CYS54
|
4.3
|
0.0
|
1.0
|
HG22
|
A:ILE29
|
4.4
|
0.0
|
1.0
|
CA
|
A:CYS51
|
4.4
|
0.0
|
1.0
|
HB2
|
A:CYS51
|
4.4
|
0.0
|
1.0
|
HB
|
A:ILE29
|
4.5
|
0.0
|
1.0
|
N
|
A:GLY28
|
4.6
|
0.0
|
1.0
|
ND2
|
A:ASN26
|
4.6
|
0.0
|
1.0
|
C
|
A:ASN26
|
4.6
|
0.0
|
1.0
|
O
|
A:CYS51
|
4.7
|
0.0
|
1.0
|
CA
|
A:CYS24
|
4.7
|
0.0
|
1.0
|
CB
|
A:ILE29
|
4.7
|
0.0
|
1.0
|
HB2
|
A:ASN26
|
4.8
|
0.0
|
1.0
|
HA
|
A:PHE50
|
4.8
|
0.0
|
1.0
|
CB
|
A:SER53
|
4.8
|
0.0
|
1.0
|
CG
|
A:ASN26
|
4.8
|
0.0
|
1.0
|
C
|
A:CYS27
|
4.8
|
0.0
|
1.0
|
CA
|
A:ASN26
|
4.8
|
0.0
|
1.0
|
HA
|
A:CYS54
|
4.9
|
0.0
|
1.0
|
N
|
A:ILE29
|
4.9
|
0.0
|
1.0
|
HA
|
A:CYS27
|
4.9
|
0.0
|
1.0
|
N
|
A:ASN26
|
4.9
|
0.0
|
1.0
|
C
|
A:CYS51
|
4.9
|
0.0
|
1.0
|
|
Zinc binding site 2 out
of 2 in 2fc7
Go back to
Zinc Binding Sites List in 2fc7
Zinc binding site 2 out
of 2 in the Solution Structure of the Zz Domain of ZZZ3 Protein
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Solution Structure of the Zz Domain of ZZZ3 Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn401
b:0.0
occ:1.00
|
ND1
|
A:HIS64
|
2.1
|
0.0
|
1.0
|
ND1
|
A:HIS68
|
2.1
|
0.0
|
1.0
|
SG
|
A:CYS39
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS42
|
2.4
|
0.0
|
1.0
|
HA
|
A:HIS64
|
2.6
|
0.0
|
1.0
|
HB3
|
A:HIS68
|
2.7
|
0.0
|
1.0
|
H
|
A:CYS42
|
2.8
|
0.0
|
1.0
|
CG
|
A:HIS68
|
2.9
|
0.0
|
1.0
|
CE1
|
A:HIS64
|
2.9
|
0.0
|
1.0
|
HE1
|
A:HIS64
|
3.0
|
0.0
|
1.0
|
CE1
|
A:HIS68
|
3.1
|
0.0
|
1.0
|
CB
|
A:HIS68
|
3.1
|
0.0
|
1.0
|
CG
|
A:HIS64
|
3.2
|
0.0
|
1.0
|
HB2
|
A:HIS68
|
3.2
|
0.0
|
1.0
|
HB3
|
A:ASP41
|
3.2
|
0.0
|
1.0
|
H
|
A:LYS65
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS42
|
3.5
|
0.0
|
1.0
|
HE1
|
A:HIS68
|
3.5
|
0.0
|
1.0
|
HB2
|
A:CYS42
|
3.5
|
0.0
|
1.0
|
CA
|
A:HIS64
|
3.5
|
0.0
|
1.0
|
N
|
A:CYS42
|
3.5
|
0.0
|
1.0
|
HB2
|
A:HIS64
|
3.6
|
0.0
|
1.0
|
CB
|
A:HIS64
|
3.6
|
0.0
|
1.0
|
CB
|
A:CYS39
|
3.6
|
0.0
|
1.0
|
HB2
|
A:CYS39
|
3.8
|
0.0
|
1.0
|
HB3
|
A:CYS39
|
3.8
|
0.0
|
1.0
|
CA
|
A:CYS42
|
3.9
|
0.0
|
1.0
|
HD12
|
A:LEU48
|
4.0
|
0.0
|
1.0
|
CD2
|
A:HIS68
|
4.0
|
0.0
|
1.0
|
HA
|
A:CYS42
|
4.1
|
0.0
|
1.0
|
NE2
|
A:HIS64
|
4.1
|
0.0
|
1.0
|
N
|
A:LYS65
|
4.1
|
0.0
|
1.0
|
NE2
|
A:HIS68
|
4.1
|
0.0
|
1.0
|
CD2
|
A:HIS64
|
4.2
|
0.0
|
1.0
|
CB
|
A:ASP41
|
4.2
|
0.0
|
1.0
|
C
|
A:HIS64
|
4.4
|
0.0
|
1.0
|
HB3
|
A:CYS42
|
4.4
|
0.0
|
1.0
|
N
|
A:HIS64
|
4.5
|
0.0
|
1.0
|
H
|
A:ASP41
|
4.6
|
0.0
|
1.0
|
C
|
A:ASP41
|
4.6
|
0.0
|
1.0
|
CA
|
A:HIS68
|
4.6
|
0.0
|
1.0
|
HB2
|
A:LEU48
|
4.6
|
0.0
|
1.0
|
HB3
|
A:HIS64
|
4.7
|
0.0
|
1.0
|
O
|
A:LYS65
|
4.8
|
0.0
|
1.0
|
CG
|
A:ASP41
|
4.8
|
0.0
|
1.0
|
CA
|
A:ASP41
|
4.8
|
0.0
|
1.0
|
HD23
|
A:LEU70
|
4.8
|
0.0
|
1.0
|
OD1
|
A:ASP41
|
4.9
|
0.0
|
1.0
|
HB2
|
A:ASP41
|
4.9
|
0.0
|
1.0
|
N
|
A:ASP41
|
4.9
|
0.0
|
1.0
|
HA
|
A:HIS68
|
4.9
|
0.0
|
1.0
|
HE2
|
A:HIS64
|
4.9
|
0.0
|
1.0
|
HD2
|
A:HIS68
|
5.0
|
0.0
|
1.0
|
CA
|
A:CYS39
|
5.0
|
0.0
|
1.0
|
|
Reference:
W.Dang,
Y.Muto,
M.Inoue,
T.Kigawa,
M.Shirouzu,
T.Terada,
S.Yokoyama.
Solution Structure of the Zz Domain of ZZZ3 Protein To Be Published.
Page generated: Wed Oct 16 23:44:30 2024
|