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Zinc in PDB 2ecy: Solution Structure of the Zinc Finger, C3HC4 Type (Ring Finger)" Domain of Tnf Receptor-Associated Factor 3

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the Zinc Finger, C3HC4 Type (Ring Finger)" Domain of Tnf Receptor-Associated Factor 3 (pdb code 2ecy). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Zinc Finger, C3HC4 Type (Ring Finger)" Domain of Tnf Receptor-Associated Factor 3, PDB code: 2ecy:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2ecy

Go back to Zinc Binding Sites List in 2ecy
Zinc binding site 1 out of 2 in the Solution Structure of the Zinc Finger, C3HC4 Type (Ring Finger)" Domain of Tnf Receptor-Associated Factor 3


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Zinc Finger, C3HC4 Type (Ring Finger)" Domain of Tnf Receptor-Associated Factor 3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:0.0
occ:1.00
SG A:CYS21 2.2 0.0 1.0
SG A:CYS41 2.3 0.0 1.0
SG A:CYS38 2.4 0.0 1.0
SG A:CYS18 2.4 0.0 1.0
H A:CYS21 2.7 0.0 1.0
H A:CYS38 3.2 0.0 1.0
HB3 A:CYS38 3.2 0.0 1.0
HB3 A:LYS20 3.2 0.0 1.0
HB3 A:CYS18 3.2 0.0 1.0
CB A:CYS41 3.2 0.0 1.0
CB A:CYS18 3.2 0.0 1.0
CB A:CYS38 3.4 0.0 1.0
CB A:CYS21 3.5 0.0 1.0
N A:CYS21 3.5 0.0 1.0
H A:CYS41 3.6 0.0 1.0
HB3 A:CYS21 3.6 0.0 1.0
CB A:LYS20 3.9 0.0 1.0
HB3 A:CYS41 3.9 0.0 1.0
N A:CYS38 4.0 0.0 1.0
HD2 A:PHE37 4.1 0.0 1.0
CA A:CYS21 4.1 0.0 1.0
H A:LYS20 4.2 0.0 1.0
H A:LEU23 4.2 0.0 1.0
CA A:CYS38 4.3 0.0 1.0
N A:CYS41 4.3 0.0 1.0
HG A:LEU23 4.3 0.0 1.0
CA A:CYS41 4.4 0.0 1.0
C A:LYS20 4.5 0.0 1.0
CA A:LYS20 4.6 0.0 1.0
H A:HIS22 4.7 0.0 1.0
HB3 A:PHE37 4.7 0.0 1.0
HD3 A:LYS20 4.7 0.0 1.0
CB A:LEU23 4.7 0.0 1.0
CA A:CYS18 4.7 0.0 1.0
N A:LYS20 4.7 0.0 1.0
HA A:PHE37 4.8 0.0 1.0
C A:CYS21 4.9 0.0 1.0
HA A:CYS41 4.9 0.0 1.0
O A:CYS38 5.0 0.0 1.0
C A:CYS38 5.0 0.0 1.0
H A:MET42 5.0 0.0 1.0
HA A:CYS21 5.0 0.0 1.0
CG A:LEU23 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 2ecy

Go back to Zinc Binding Sites List in 2ecy
Zinc binding site 2 out of 2 in the Solution Structure of the Zinc Finger, C3HC4 Type (Ring Finger)" Domain of Tnf Receptor-Associated Factor 3


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Zinc Finger, C3HC4 Type (Ring Finger)" Domain of Tnf Receptor-Associated Factor 3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:0.0
occ:1.00
ND1 A:HIS35 2.0 0.0 1.0
SG A:CYS56 2.2 0.0 1.0
SG A:CYS53 2.3 0.0 1.0
SG A:CYS33 2.3 0.0 1.0
H A:CYS56 2.5 0.0 1.0
HB2 A:ALA55 2.6 0.0 1.0
CE1 A:HIS35 2.8 0.0 1.0
HE1 A:HIS35 2.9 0.0 1.0
CG A:HIS35 3.1 0.0 1.0
H A:GLN57 3.3 0.0 1.0
N A:CYS56 3.3 0.0 1.0
HB3 A:CYS53 3.4 0.0 1.0
CB A:CYS53 3.5 0.0 1.0
CB A:CYS33 3.5 0.0 1.0
CB A:CYS56 3.5 0.0 1.0
CB A:ALA55 3.5 0.0 1.0
HB1 A:ALA55 3.6 0.0 1.0
H A:HIS35 3.6 0.0 1.0
CB A:HIS35 3.7 0.0 1.0
HB3 A:CYS56 3.7 0.0 1.0
HB3 A:CYS33 3.9 0.0 1.0
CA A:CYS56 3.9 0.0 1.0
NE2 A:HIS35 3.9 0.0 1.0
N A:GLN57 4.1 0.0 1.0
CD2 A:HIS35 4.1 0.0 1.0
HB3 A:ALA55 4.2 0.0 1.0
C A:ALA55 4.3 0.0 1.0
HB3 A:HIS35 4.4 0.0 1.0
CA A:ALA55 4.4 0.0 1.0
N A:HIS35 4.5 0.0 1.0
O A:CYS53 4.5 0.0 1.0
C A:CYS56 4.5 0.0 1.0
H A:ALA55 4.7 0.0 1.0
CA A:HIS35 4.7 0.0 1.0
HE2 A:HIS35 4.8 0.0 1.0
H A:GLU58 4.8 0.0 1.0
CA A:CYS33 4.8 0.0 1.0
CA A:CYS53 4.8 0.0 1.0
HE1 A:PHE37 4.9 0.0 1.0
N A:ALA55 4.9 0.0 1.0
HG1 A:THR31 4.9 0.0 1.0
HA A:CYS56 4.9 0.0 1.0
C A:CYS53 5.0 0.0 1.0
C A:CYS33 5.0 0.0 1.0
OG1 A:THR31 5.0 0.0 1.0

Reference:

H.Abe, K.Miyamoto, N.Tochio, M.Yoneyama, T.Kigawa, S.Yokoyama. Solution Structure of the Zinc Finger, C3HC4 Type (Ring Finger)" Domain of Tnf Receptor-Associated Factor 3 To Be Published.
Page generated: Wed Dec 16 03:23:49 2020

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