Zinc in PDB 2dq5: Solution Structure of the MID1 B BOX2 Chc(D/C)C2H2 Zinc- Binding Domain: Insights Into An Evolutionary Conserved Ring Fold

The binding sites of Zinc atom in the Solution Structure of the MID1 B BOX2 Chc(D/C)C2H2 Zinc- Binding Domain: Insights Into An Evolutionary Conserved Ring Fold (pdb code 2dq5). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the MID1 B BOX2 Chc(D/C)C2H2 Zinc- Binding Domain: Insights Into An Evolutionary Conserved Ring Fold, PDB code: 2dq5:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Solution Structure of the MID1 B BOX2 Chc(D/C)C2H2 Zinc- Binding Domain: Insights Into An Evolutionary Conserved Ring Fold


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the MID1 B BOX2 Chc(D/C)C2H2 Zinc- Binding Domain: Insights Into An Evolutionary Conserved Ring Fold within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn1175 b:31.3 occ:1.00 ND1 A:HIS178 2.2 63.3 1.0 SG A:CYS175 2.3 24.4 1.0 SG A:CYS195 2.4 23.2 1.0 SG A:CYS198 2.5 24.1 1.0 CE1 A:HIS178 2.8 53.3 1.0 HE1 A:HIS178 2.8 52.4 1.0 CB A:CYS175 3.1 55.4 1.0 HB2 A:CYS175 3.1 60.5 1.0 HB3 A:CYS175 3.2 14.3 1.0 CG A:HIS178 3.3 55.0 1.0 HB2 A:HIS178 3.4 73.3 1.0 H A:CYS195 3.7 4.2 1.0 HB3 A:LEU197 3.7 21.1 1.0 CB A:CYS198 3.8 14.4 1.0 HB2 A:CYS198 3.8 15.5 1.0 H A:CYS198 3.8 33.3 1.0 CB A:CYS195 3.8 44.1 1.0 HB3 A:CYS195 3.8 24.5 1.0 CB A:HIS178 3.9 11.3 1.0 H A:HIS178 3.9 13.5 1.0 NE2 A:HIS178 4.0 60.3 1.0 N A:CYS198 4.1 45.4 1.0 CD2 A:HIS178 4.2 33.4 1.0 N A:CYS195 4.3 12.4 1.0 CA A:CYS198 4.4 73.2 1.0 HA A:CYS198 4.4 74.5 1.0 CA A:CYS175 4.5 3.1 1.0 HB2 A:LEU197 4.6 13.1 1.0 CB A:LEU197 4.6 14.1 1.0 CA A:CYS195 4.6 4.1 1.0 HB3 A:HIS178 4.6 75.0 1.0 HB2 A:CYS195 4.6 74.2 1.0 HB3 A:CYS198 4.7 22.5 1.0 N A:HIS178 4.7 3.1 1.0 HA A:CYS175 4.7 55.2 1.0 C A:LEU197 4.8 72.3 1.0 H A:GLU177 4.8 13.5 1.0 H A:LEU197 4.8 33.5 1.0 HA A:ILE194 4.9 71.1 1.0 H A:LEU176 4.9 60.2 1.0 HB3 A:GLU181 4.9 3.2 1.0 CA A:HIS178 4.9 4.1 1.0 HB3 A:GLU177 5.0 1.1 1.0

Zinc binding site 2 out of 2 in the Solution Structure of the MID1 B BOX2 Chc(D/C)C2H2 Zinc- Binding Domain: Insights Into An Evolutionary Conserved Ring Fold


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the MID1 B BOX2 Chc(D/C)C2H2 Zinc- Binding Domain: Insights Into An Evolutionary Conserved Ring Fold within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn1187 b:51.4 occ:1.00 ND1 A:HIS207 2.1 32.5 1.0 ND1 A:HIS204 2.1 11.1 1.0 SG A:CYS187 2.3 2.3 1.0 OD1 A:ASP190 2.3 23.4 1.0 HB3 A:HIS204 2.9 41.5 1.0 HB3 A:CYS187 2.9 44.0 1.0 CG A:HIS207 3.0 11.3 1.0 CE1 A:HIS204 3.1 43.5 1.0 CG A:HIS204 3.1 51.4 1.0 HB3 A:HIS207 3.1 54.1 1.0 CE1 A:HIS207 3.1 2.1 1.0 CB A:CYS187 3.1 3.1 1.0 HB2 A:HIS207 3.2 42.0 1.0 HG1 A:THR189 3.2 60.2 1.0 HE1 A:HIS204 3.3 52.2 1.0 CB A:HIS207 3.3 65.1 1.0 HB2 A:CYS187 3.4 44.3 1.0 HA A:HIS204 3.4 63.2 1.0 HE1 A:HIS207 3.4 31.3 1.0 CB A:HIS204 3.4 23.4 1.0 CG A:ASP190 3.5 34.3 1.0 HG22 A:ILE194 3.8 1.3 1.0 OG1 A:THR189 3.9 23.2 1.0 CA A:HIS204 3.9 11.4 1.0 H A:ASP190 4.1 4.2 1.0 CD2 A:HIS207 4.2 41.4 1.0 NE2 A:HIS204 4.2 4.3 1.0 NE2 A:HIS207 4.2 23.4 1.0 CD2 A:HIS204 4.2 44.4 1.0 OD2 A:ASP190 4.2 55.0 1.0 HG12 A:ILE194 4.2 54.2 1.0 HB2 A:ASP190 4.2 31.3 1.0 HB2 A:HIS204 4.4 0.3 1.0 CB A:ASP190 4.5 32.4 1.0 CA A:CYS187 4.5 15.3 1.0 HA A:CYS187 4.7 1.1 1.0 CA A:HIS207 4.8 41.1 1.0 CG2 A:ILE194 4.8 34.5 1.0 N A:HIS204 4.9 13.3 1.0 N A:ASP190 4.9 55.2 1.0 C A:HIS204 5.0 43.5 1.0 HG21 A:ILE194 5.0 22.2 1.0

M.A.Massiah, J.A.B.Matts, K.M.Short, B.N.Simmons, S.Singireddy, Z.Yi, T.C.Cox. Solution Structure of the MID1 B-BOX2 Chc(D/C)C(2)H(2) Zinc-Binding Domain: Insights Into An Evolutionarily Conserved Ring Fold J.Mol.Biol. V. 369 1 2007.
ISSN: ISSN 0022-2836
PubMed: 17428496
DOI: 10.1016/J.JMB.2007.03.017