Zinc in PDB 2dip: Solution Structure of the Zz Domain of Zinc Finger Swim Domain Containing Protein 2

The binding sites of Zinc atom in the Solution Structure of the Zz Domain of Zinc Finger Swim Domain Containing Protein 2 (pdb code 2dip). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Zz Domain of Zinc Finger Swim Domain Containing Protein 2, PDB code: 2dip:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Solution Structure of the Zz Domain of Zinc Finger Swim Domain Containing Protein 2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Zz Domain of Zinc Finger Swim Domain Containing Protein 2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:0.0 occ:1.00 SG A:CYS58 2.2 0.0 1.0 SG A:CYS37 2.3 0.0 1.0 SG A:CYS61 2.3 0.0 1.0 SG A:CYS34 2.4 0.0 1.0 HB2 A:CYS61 2.9 0.0 1.0 H A:CYS37 2.9 0.0 1.0 HB2 A:CYS34 3.1 0.0 1.0 CB A:CYS61 3.2 0.0 1.0 CB A:CYS34 3.2 0.0 1.0 H A:CYS61 3.2 0.0 1.0 HB3 A:CYS37 3.3 0.0 1.0 H A:CYS58 3.3 0.0 1.0 HB3 A:CYS34 3.4 0.0 1.0 CB A:CYS37 3.4 0.0 1.0 HD21 A:LEU57 3.5 0.0 1.0 HB3 A:ASN36 3.6 0.0 1.0 CB A:CYS58 3.7 0.0 1.0 HB3 A:CYS58 3.7 0.0 1.0 N A:CYS37 3.8 0.0 1.0 HB3 A:GLU60 3.9 0.0 1.0 H A:GLN39 4.0 0.0 1.0 H A:LYS38 4.0 0.0 1.0 N A:CYS61 4.0 0.0 1.0 HB3 A:CYS61 4.0 0.0 1.0 N A:CYS58 4.0 0.0 1.0 CA A:CYS37 4.2 0.0 1.0 CA A:CYS61 4.2 0.0 1.0 HB3 A:GLN39 4.2 0.0 1.0 HB2 A:GLN39 4.2 0.0 1.0 HB2 A:CYS37 4.3 0.0 1.0 H A:ASN36 4.3 0.0 1.0 CA A:CYS58 4.4 0.0 1.0 HA A:LEU57 4.4 0.0 1.0 HB2 A:CYS58 4.5 0.0 1.0 CD2 A:LEU57 4.5 0.0 1.0 N A:LYS38 4.6 0.0 1.0 HA A:CYS61 4.6 0.0 1.0 CB A:ASN36 4.6 0.0 1.0 HD21 A:ASN36 4.7 0.0 1.0 HD23 A:LEU57 4.7 0.0 1.0 CA A:CYS34 4.7 0.0 1.0 CB A:GLN39 4.7 0.0 1.0 HD22 A:LEU57 4.8 0.0 1.0 O A:CYS58 4.8 0.0 1.0 C A:CYS37 4.8 0.0 1.0 HB2 A:ASN36 4.9 0.0 1.0 N A:GLN39 4.9 0.0 1.0 HA A:CYS34 4.9 0.0 1.0 CB A:GLU60 4.9 0.0 1.0 C A:ASN36 4.9 0.0 1.0 C A:CYS58 5.0 0.0 1.0 C A:LEU57 5.0 0.0 1.0

Zinc binding site 2 out of 2 in the Solution Structure of the Zz Domain of Zinc Finger Swim Domain Containing Protein 2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Zz Domain of Zinc Finger Swim Domain Containing Protein 2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:0.0 occ:1.00 ND1 A:HIS70 2.1 0.0 1.0 NE2 A:HIS67 2.1 0.0 1.0 SG A:CYS49 2.4 0.0 1.0 SG A:CYS52 2.4 0.0 1.0 CD2 A:HIS67 2.9 0.0 1.0 HB2 A:HIS70 3.0 0.0 1.0 HD2 A:HIS67 3.0 0.0 1.0 CG A:HIS70 3.0 0.0 1.0 CE1 A:HIS70 3.0 0.0 1.0 CE1 A:HIS67 3.2 0.0 1.0 HE1 A:PHE72 3.2 0.0 1.0 HE1 A:HIS70 3.3 0.0 1.0 CB A:HIS70 3.3 0.0 1.0 HB2 A:CYS52 3.4 0.0 1.0 HB2 A:GLU51 3.4 0.0 1.0 HB3 A:HIS70 3.4 0.0 1.0 HE1 A:HIS67 3.5 0.0 1.0 CB A:CYS52 3.6 0.0 1.0 CB A:CYS49 3.6 0.0 1.0 HB2 A:CYS49 3.7 0.0 1.0 H A:CYS52 3.8 0.0 1.0 HB3 A:CYS49 3.8 0.0 1.0 N A:CYS52 4.1 0.0 1.0 CG A:HIS67 4.1 0.0 1.0 NE2 A:HIS70 4.1 0.0 1.0 CD2 A:HIS70 4.2 0.0 1.0 ND1 A:HIS67 4.2 0.0 1.0 CE1 A:PHE72 4.2 0.0 1.0 HB3 A:CYS52 4.4 0.0 1.0 CA A:CYS52 4.4 0.0 1.0 CB A:GLU51 4.5 0.0 1.0 H A:GLU51 4.5 0.0 1.0 HZ A:PHE72 4.5 0.0 1.0 HA A:CYS52 4.7 0.0 1.0 C A:GLU51 4.7 0.0 1.0 HB3 A:GLU51 4.8 0.0 1.0 CA A:HIS70 4.8 0.0 1.0 CZ A:PHE72 4.9 0.0 1.0 CA A:CYS49 5.0 0.0 1.0 H A:HIS70 5.0 0.0 1.0

W.Dang, Y.Muto, M.Inoue, T.Kigawa, M.Shirouzu, T.Terada, S.Yokoyama. Solution Structure of the Zz Domain of Zinc Finger Swim Domain Containing Protein 2 To Be Published.