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Zinc in PDB 2db6: Solution Structure of Rsgi Ruh-051, A C1 Domain of STAC3 From Human Cdna

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of Rsgi Ruh-051, A C1 Domain of STAC3 From Human Cdna (pdb code 2db6). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of Rsgi Ruh-051, A C1 Domain of STAC3 From Human Cdna, PDB code: 2db6:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2db6

Go back to Zinc Binding Sites List in 2db6
Zinc binding site 1 out of 2 in the Solution Structure of Rsgi Ruh-051, A C1 Domain of STAC3 From Human Cdna


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of Rsgi Ruh-051, A C1 Domain of STAC3 From Human Cdna within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:0.0
occ:1.00
ND1 A:HIS18 2.1 0.0 1.0
SG A:CYS48 2.3 0.0 1.0
SG A:CYS51 2.3 0.0 1.0
SG A:CYS68 2.3 0.0 1.0
H A:CYS51 2.8 0.0 1.0
CE1 A:HIS18 2.9 0.0 1.0
HE1 A:HIS18 3.0 0.0 1.0
HB2 A:ASN50 3.1 0.0 1.0
HB3 A:CYS51 3.2 0.0 1.0
CG A:HIS18 3.3 0.0 1.0
CB A:CYS48 3.3 0.0 1.0
HB2 A:CYS68 3.4 0.0 1.0
HB3 A:CYS48 3.4 0.0 1.0
CB A:CYS51 3.4 0.0 1.0
HB3 A:HIS18 3.4 0.0 1.0
HA A:HIS18 3.4 0.0 1.0
CB A:CYS68 3.5 0.0 1.0
HB2 A:CYS48 3.5 0.0 1.0
N A:CYS51 3.6 0.0 1.0
HA A:CYS68 3.7 0.0 1.0
CB A:HIS18 3.7 0.0 1.0
H A:LYS19 3.9 0.0 1.0
HE1 A:PHE20 3.9 0.0 1.0
HG21 A:THR53 4.0 0.0 1.0
CB A:ASN50 4.1 0.0 1.0
CA A:CYS51 4.1 0.0 1.0
CA A:HIS18 4.1 0.0 1.0
NE2 A:HIS18 4.1 0.0 1.0
CA A:CYS68 4.2 0.0 1.0
H A:ASN50 4.2 0.0 1.0
HD21 A:ASN50 4.2 0.0 1.0
HB2 A:CYS51 4.2 0.0 1.0
HB3 A:ASN50 4.3 0.0 1.0
CD2 A:HIS18 4.3 0.0 1.0
HB3 A:CYS68 4.3 0.0 1.0
H A:SER69 4.4 0.0 1.0
H A:LYS52 4.4 0.0 1.0
CE1 A:PHE20 4.5 0.0 1.0
C A:ASN50 4.6 0.0 1.0
N A:LYS19 4.7 0.0 1.0
CA A:CYS48 4.8 0.0 1.0
HB2 A:HIS18 4.8 0.0 1.0
CA A:ASN50 4.8 0.0 1.0
H A:THR53 4.8 0.0 1.0
HZ A:PHE20 4.8 0.0 1.0
N A:ASN50 4.9 0.0 1.0
C A:CYS68 4.9 0.0 1.0
HB A:THR53 4.9 0.0 1.0
HA A:CYS51 4.9 0.0 1.0
N A:SER69 4.9 0.0 1.0
CG2 A:THR53 4.9 0.0 1.0
CZ A:PHE20 4.9 0.0 1.0
HG23 A:THR53 4.9 0.0 1.0
C A:CYS51 5.0 0.0 1.0
C A:HIS18 5.0 0.0 1.0
HE2 A:HIS18 5.0 0.0 1.0
ND2 A:ASN50 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 2db6

Go back to Zinc Binding Sites List in 2db6
Zinc binding site 2 out of 2 in the Solution Structure of Rsgi Ruh-051, A C1 Domain of STAC3 From Human Cdna


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of Rsgi Ruh-051, A C1 Domain of STAC3 From Human Cdna within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:0.0
occ:1.00
ND1 A:HIS56 2.1 0.0 1.0
SG A:CYS59 2.2 0.0 1.0
SG A:CYS34 2.3 0.0 1.0
SG A:CYS31 2.3 0.0 1.0
HB2 A:HIS56 2.7 0.0 1.0
H A:HIS56 2.8 0.0 1.0
CG A:HIS56 3.0 0.0 1.0
CE1 A:HIS56 3.1 0.0 1.0
CB A:CYS31 3.2 0.0 1.0
HB3 A:CYS34 3.2 0.0 1.0
HB3 A:CYS31 3.3 0.0 1.0
HB2 A:CYS31 3.3 0.0 1.0
HE1 A:HIS56 3.4 0.0 1.0
CB A:HIS56 3.4 0.0 1.0
HE2 A:HIS58 3.5 0.0 1.0
CB A:CYS34 3.5 0.0 1.0
HB2 A:CYS59 3.5 0.0 1.0
CB A:CYS59 3.5 0.0 1.0
N A:HIS56 3.6 0.0 1.0
H A:CYS34 3.8 0.0 1.0
HB3 A:CYS59 3.8 0.0 1.0
NE2 A:HIS58 3.9 0.0 1.0
HB2 A:ARG36 4.0 0.0 1.0
HA A:ILE55 4.0 0.0 1.0
H A:ARG36 4.1 0.0 1.0
HB2 A:CYS34 4.1 0.0 1.0
CA A:HIS56 4.1 0.0 1.0
NE2 A:HIS56 4.1 0.0 1.0
CD2 A:HIS56 4.1 0.0 1.0
HG12 A:ILE38 4.2 0.0 1.0
HB3 A:HIS56 4.3 0.0 1.0
H A:ALA35 4.3 0.0 1.0
N A:CYS34 4.5 0.0 1.0
CA A:CYS34 4.6 0.0 1.0
CD2 A:HIS58 4.6 0.0 1.0
O A:ARG36 4.6 0.0 1.0
H A:CYS59 4.6 0.0 1.0
CE1 A:HIS58 4.6 0.0 1.0
HD2 A:HIS58 4.7 0.0 1.0
CA A:CYS31 4.7 0.0 1.0
C A:ILE55 4.7 0.0 1.0
HG13 A:ILE38 4.7 0.0 1.0
HA A:HIS56 4.7 0.0 1.0
HE1 A:HIS58 4.8 0.0 1.0
CA A:CYS59 4.8 0.0 1.0
HD12 A:ILE38 4.8 0.0 1.0
CA A:ILE55 4.8 0.0 1.0
HB A:VAL33 4.9 0.0 1.0
HB A:ILE55 4.9 0.0 1.0
CG1 A:ILE38 4.9 0.0 1.0
N A:ALA35 4.9 0.0 1.0
HA A:CYS31 4.9 0.0 1.0
N A:ARG36 4.9 0.0 1.0
HE2 A:HIS56 5.0 0.0 1.0

Reference:

T.Abe, C.Kurosaki, M.Yoshida, F.Hayashi, H.Hirota, S.Yokoyama. Solution Structure of Rsgi Ruh-051, A C1 Domain of STAC3 From Human Cdna To Be Published.
Page generated: Wed Dec 16 03:21:03 2020

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