Zinc in PDB 2d9g: Solution Structure of the Zf-Ranbp Domain of YY1-Associated Factor 2

The binding sites of Zinc atom in the Solution Structure of the Zf-Ranbp Domain of YY1-Associated Factor 2 (pdb code 2d9g). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Solution Structure of the Zf-Ranbp Domain of YY1-Associated Factor 2, PDB code: 2d9g:

Zinc binding site 1 out of 1 in the Solution Structure of the Zf-Ranbp Domain of YY1-Associated Factor 2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Zf-Ranbp Domain of YY1-Associated Factor 2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:0.0 occ:1.00 SG A:CYS17 2.2 0.0 1.0 SG A:CYS31 2.3 0.0 1.0 SG A:CYS14 2.4 0.0 1.0 SG A:CYS28 2.4 0.0 1.0 H A:CYS31 2.9 0.0 1.0 H A:CYS17 2.9 0.0 1.0 HG13 A:VAL33 3.2 0.0 1.0 CB A:CYS14 3.3 0.0 1.0 HB3 A:CYS31 3.3 0.0 1.0 HB2 A:CYS14 3.3 0.0 1.0 HB3 A:CYS14 3.3 0.0 1.0 HB A:VAL16 3.3 0.0 1.0 CB A:CYS31 3.4 0.0 1.0 CB A:CYS28 3.4 0.0 1.0 HB2 A:CYS28 3.4 0.0 1.0 HG11 A:VAL33 3.4 0.0 1.0 CB A:CYS17 3.5 0.0 1.0 HB3 A:CYS28 3.5 0.0 1.0 HB3 A:CYS17 3.6 0.0 1.0 HB3 A:PHE19 3.6 0.0 1.0 HD22 A:ASN21 3.7 0.0 1.0 N A:CYS17 3.7 0.0 1.0 HB3 A:MET30 3.7 0.0 1.0 N A:CYS31 3.7 0.0 1.0 H A:PHE19 3.8 0.0 1.0 H A:VAL33 3.8 0.0 1.0 CG1 A:VAL33 3.8 0.0 1.0 HG3 A:MET30 4.0 0.0 1.0 H A:ASP32 4.0 0.0 1.0 CA A:CYS31 4.1 0.0 1.0 CA A:CYS17 4.2 0.0 1.0 HB2 A:CYS31 4.3 0.0 1.0 H A:THR18 4.4 0.0 1.0 CB A:VAL16 4.4 0.0 1.0 H A:VAL16 4.4 0.0 1.0 HB2 A:CYS17 4.4 0.0 1.0 HB A:VAL33 4.5 0.0 1.0 H A:MET30 4.5 0.0 1.0 CB A:MET30 4.5 0.0 1.0 N A:ASP32 4.6 0.0 1.0 CB A:PHE19 4.6 0.0 1.0 HG2 A:MET30 4.6 0.0 1.0 CG A:MET30 4.6 0.0 1.0 ND2 A:ASN21 4.6 0.0 1.0 HG12 A:VAL33 4.6 0.0 1.0 HG13 A:VAL16 4.6 0.0 1.0 HB2 A:PHE19 4.7 0.0 1.0 HD2 A:PHE19 4.7 0.0 1.0 C A:CYS17 4.7 0.0 1.0 CA A:CYS14 4.7 0.0 1.0 C A:CYS31 4.7 0.0 1.0 C A:VAL16 4.7 0.0 1.0 N A:THR18 4.7 0.0 1.0 N A:PHE19 4.7 0.0 1.0 CB A:VAL33 4.7 0.0 1.0 N A:VAL33 4.8 0.0 1.0 H A:SER15 4.8 0.0 1.0 CA A:CYS28 4.8 0.0 1.0 C A:MET30 4.8 0.0 1.0 N A:VAL16 4.9 0.0 1.0 H A:MET29 4.9 0.0 1.0 HG22 A:VAL16 4.9 0.0 1.0 CA A:VAL16 4.9 0.0 1.0 N A:MET30 5.0 0.0 1.0

H.P.Zhang, K.Izumi, M.Yoshida, F.Hayashi, S.Yokoyama. Solution Structure of the Zf-Ranbp Domain of YY1-Associated Factor 2 To Be Published.