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Zinc in PDB 2clu: Recombinant Human H Ferritin, K86Q and E107D Mutant

Enzymatic activity of Recombinant Human H Ferritin, K86Q and E107D Mutant

All present enzymatic activity of Recombinant Human H Ferritin, K86Q and E107D Mutant:
1.16.3.1;

Protein crystallography data

The structure of Recombinant Human H Ferritin, K86Q and E107D Mutant, PDB code: 2clu was solved by L.Toussaint, R.R.Crichton, J.P.Declercq, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 104.26 / 2.10
Space group F 4 3 2
Cell size a, b, c (Å), α, β, γ (°) 180.970, 180.970, 180.970, 90.00, 90.00, 90.00
R / Rfree (%) 18.4 / 24.6

Other elements in 2clu:

The structure of Recombinant Human H Ferritin, K86Q and E107D Mutant also contains other interesting chemical elements:

Calcium (Ca) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Recombinant Human H Ferritin, K86Q and E107D Mutant (pdb code 2clu). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Recombinant Human H Ferritin, K86Q and E107D Mutant, PDB code: 2clu:

Zinc binding site 1 out of 1 in 2clu

Go back to Zinc Binding Sites List in 2clu
Zinc binding site 1 out of 1 in the Recombinant Human H Ferritin, K86Q and E107D Mutant


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Recombinant Human H Ferritin, K86Q and E107D Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn212

b:68.8
occ:1.00
OE1 A:GLU62 2.2 43.2 1.0
OE1 A:GLU27 2.3 36.6 1.0
ND1 A:HIS65 2.5 40.4 1.0
CD A:GLU62 3.0 35.9 1.0
OE2 A:GLU62 3.1 40.2 1.0
CD A:GLU27 3.3 33.9 1.0
CE1 A:HIS65 3.4 44.8 1.0
CG A:HIS65 3.5 37.3 1.0
OE2 A:GLU27 3.6 43.1 1.0
CB A:HIS65 3.8 30.7 1.0
OE1 A:GLN141 4.0 46.7 1.0
O A:HOH2108 4.1 44.6 1.0
CG1 A:VAL110 4.3 29.4 1.0
CG A:GLU62 4.4 30.7 1.0
CG A:GLU27 4.5 30.4 1.0
CA A:GLU62 4.6 29.1 1.0
NE2 A:HIS65 4.6 46.6 1.0
CD2 A:HIS65 4.6 43.0 1.0
O A:HOH2075 4.6 52.2 1.0
CB A:GLU62 4.7 28.9 1.0
CB A:GLU27 4.8 25.9 1.0
CD2 A:TYR137 4.9 47.8 1.0
CE2 A:TYR137 4.9 47.2 1.0
CD A:GLN141 4.9 42.5 1.0
O A:HOH2073 5.0 50.4 1.0

Reference:

L.Toussaint, L.Bertrand, L.Hue, R.R.Crichton, J.P.Declercq. High-Resolution X-Ray Structures of Human Apoferritin H-Chain Mutants Correlated with Their Activity and Metal-Binding Sites. J.Mol.Biol. V. 365 440 2007.
ISSN: ISSN 0022-2836
PubMed: 17070541
DOI: 10.1016/J.JMB.2006.10.010
Page generated: Wed Oct 16 22:26:28 2024

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